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Table 2 Major KEGG pathways containing genes differentially expressed between OSCC subsite-related clusters

From: Global gene expression profiling of oral cavity cancers suggests molecular heterogeneity within anatomic subsites

KEGG Term p Value Gene Symbol
hsa03050:Proteasome 4.04E-03 PSMA1, PSMA2, PSMA4, PSMA5, PSMB2, PSMB6, PSMD12
hsa04350:TGF-beta signaling pathway 6.29E-02 ACVR2A, BMP7, CHRD, E2F4, PPP2R2B, RBL1, RBX1, SKP1A, SMAD4, SMURF2, TGFBR2, THBS3
hsa03010:Ribosome 2.80E-04 C15ORF15, MRPS7, RPL13, RPL18A, RPL19, RPL26, RPL27, RPL35A, RPL36A, RPL6, RPL7, RPS15A, RPS2, RPS24, RPS26, RPS26E, RPS26L, RPS27, RPS3, RPS3A, RPS7
hsa05210:Colorectal cancer 8.24E-03 AXIN2, BAX, BIRC5, CASP9, FZD8, HRAS, IGF1R, KRAS, MAPK9, MLH1, MSH3, NRAS, RALGDS, SMAD4, SOS1, TGFBR2
hsa00020:Citrate cycle (TCA cycle) 1.96E-02 ACLY, IDH3A, IDH3B, MDH2, SDHA, SDHB, SDHD
hsa01030:Glycan structures – biosynthesis 1 2.79E-02 ALG14, ALG9, B4GALT5, CHST11, CSS3, EXT1, FUT8, GALNACT-2, GALNT1, GALNTL4, HS3ST2, HS3ST3B1, MGAT5, OGT, ST3GAL1, XYLT1
hsa04110:Cell cycle 8.28E-03 ANAPC11, CCNB1, CDK4, DBF4, MAD2L1, MCM2, MCM3, MCM4, MCM5, MCM7, PTTG2, RBL1, RBX1, SKP1A, SMAD4, YWHAE, YWHAQ
hsa00190:Oxidative phosphorylation 2.50E-10 ATP5B, ATP5C1, ATP5F1, ATP5G3, ATP5H, ATP5L, ATP5O, ATP6V1C1, COX17, COX5A, COX6A1, COX6B1, COX7A2, COX7B, COX7C, CYC1, NDUFA12, NDUFA7, NDUFAB1, NDUFB10, NDUFB8, NDUFB9, NDUFS1, NDUFS4, NDUFS5, NDUFV2, PPA2, RP3-405J24.3, SDHA, SDHB, SDHD, UQCRB, UQCRFS1, UQCRH
hsa04540:Gap junction 8.56E-02 ADCY2, ADCY5, ADCY6, CSNK1D, GNAQ, GUCY1A3, HRAS, K-ALPHA-1, KRAS, NRAS, PDGFD, PRKG1, SOS1, TUBA6, TUBB6