Table 3 Prediction accuracies delivered by alternative predictors with the 89 benchmark protein chains extracted from the EVA server.
From: Prediction of protein secondary structures with a novel kernel density estimation based classifier
| Â | Q3 | Q3H_O | Q3H_P | Q3E_O | Q3E_P | Q3C_O | Q3C_P | SOV | SOVH | SOVE | SOVC |
|---|---|---|---|---|---|---|---|---|---|---|---|
Prote2S | 76.7% | 74.1% | 79.1% | 71.4% | 76.6% | 84.9% | 72.3% | 71.7% | 75.6% | 74.2% | 73.3% |
Errsig | 1.3% | 2.7% | 2.7% | 3.2% | 3.5% | 1.3% | 1.7% | 1.9% | 2.6% | 3.2% | 1.6% |
PSIPRED | 77.4% | 78.3% | 79.1% | 71.5% | 78.5% | 77.3% | 77.0% | 73.7% | 75.7% | 73.8% | 72.4% |
Errsig | 1.2% | 3.0% | 2.5% | 3.1% | 2.9% | 1.4% | 1.5% | 1.6% | 2.9% | 3.1% | 1.6% |
PROFsec | 76.9% | 76.0% | 82.1% | 75.8% | 72.3% | 79.7% | 73.6% | 73.9% | 78.4% | 78.0% | 71.6% |
Errsig | 1.1% | 2.5% | 2.5% | 2.6% | 3.2% | 1.3% | 1.4% | 1.6% | 2.5% | 2.6% | 1.7% |
PHDpsi | 75.5% | 80.8% | 76.5% | 70.4% | 70.3% | 75.0% | 75.8% | 70.9% | 78.2% | 71.7% | 69.4% |
Errsig | 1.3% | 2.4% | 2.7% | 3.0% | 3.4% | 1.5% | 1.5% | 1.7% | 2.5% | 3.0% | 1.9% |
SABLE2 | 76.5% | 75.5% | 77.3% | 70.9% | 65.4% | 80.6% | 73.7% | 71.8% | 76.3% | 72.9% | 70.7% |
Errsig | 1.2% | 2.7% | 2.9% | 3.0% | 3.8% | 1.2% | 1.5% | 1.7% | 2.7% | 3.1% | 1.7% |
PROF_king | 72.0% | 64.1% | 82.5% | 72.0% | 66.2% | 79.2% | 69.1% | 66.3% | 65.3% | 73.0% | 68.4% |
Errsig | 1.2% | 3.2% | 2.6% | 3.1% | 3.5% | 1.2% | 1.7% | 1.8% | 3.3% | 3.2% | 1.8% |