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Table 2 Observed numbers of significant clones gained and lost in a dye swap experiment.

From: Whole genome amplification and its impact on CGH array profiles

Experiment #

Description

Gain (n)

Loss (n)

Experiment 1

gDNA (Promega): Female pool vs. male pool

21

6

Experiment 2

Female control: wgaDNA vs. gDNA

20

120

Experiment 3

Female control: wgaDNA vs. gDNA

1

69

Experiment 4

Male control: wgaDNA vs. gDNA

17

134

Experiment 5

Male control: wgaDNA vs. gDNA1

11

59

Experiment 6

Male ALL gDNA vs. male control gDNA3

7

3

  1. wgaDNA is DNA amplified using GenomiPhi unless otherwise noted.
  2. 1 DNA is amplified using GenomePlex.
  3. 2 ALL patient, DNA extracted from whole blood.