From: Comparison of threshold selection methods for microarray gene co-expression matrices
Method | Dataset | Estimated Threshold | Bootstrap Mean | Differencea | Bootstrap Standard Deviation |
---|---|---|---|---|---|
Maximal Clique-2 | Anoxia | 0.90 | 0.91 | -0.01 | 0.015 |
 | Reoxy | 0.91 | 0.93 | -0.02 | 0.009 |
 | Alpha | 0.74 | 0.78 | -0.04 | 0.057 |
Spectral Clustering | Anoxia | 0.93 | 0.95 | -0.02 | 0.012 |
 | Reoxy | 0.97 | 0.97 | 0.00 | 0.011 |
 | Alpha | 0.89 | **0.95 | -0.06 | 0.017 |
Top 1 Percent | Anoxia | 0.81 | 0.83 | -0.02 | 0.011 |
 | Reoxy | 0.81 | 0.84 | -0.03 | 0.016 |
 | Alpha | 0.72 | **0.79 | -0.07 | 0.027 |
Control Spot | Anoxia | 0.93 | 0.95 | -0.02 | 0.015 |
 | Reoxy | 0.83 | **0.90 | -0.07 | 0.034 |
 | Alpha | 0.70 | **0.82 | -0.12 | 0.043 |