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Table 4 Cocktails used for selective PCR in AFLP.

From: Validation of phylogenetic signals in amplified fragment length data: testing the utility and reliability in closely related taxa

Selective Cocktail

 

Reagent

Quantity (μl)

5 pmol Labeled Selective Eco RI Primer

1.5

15 pmol Unlabeled Selective Mse I Primer

1.5

10 mM dNTP

3.0

Formamide

0.5

25 mM MgCl2

3.0

H2O

10.0

10× PCR Buffer

2.5

Taq DNA Polymerase

0.5

Total

22.5**

** Add 20 μl allows for pipetting error

 

Reaction cocktails for selective PCR amplifications of the ligated DNA

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