From: Association analysis of PRNP gene region with chronic wasting disease in Rocky Mountain elk
Marker | dbSNP accession | Sequence variant | Minor Allele | Minor Allele Frequency (%) | Impact on PRNP |
---|---|---|---|---|---|
1 | ss115456950 | g.371T > C1 | C | 15.1 | Â |
2 | ss115456954 | g.986A > G1 | G | 15.3 | Â |
3 | ss119994796 | g.598T > C2 | T | 23.4 | Â |
4 | ss119994799 | g.655C > T2 | T | 1.3 | Â |
5 | ss119994806 | g.918A > G2 | G | 14.8 | Â |
6 | ss119994811 | g.1131C > G2 | G | 13.4 | Â |
7 | ss119994818 | g.1456C > G2 | G | 8.0 | Â |
8 | ss119994819 | g.1477C > T2 | T | 23.5 | Â |
9 | ss119994821 | g.1591T > C2 | C | 13.9 | Â |
10 | ss119994830 | g.17361G > A2 | A | 23.9 | Â |
11 | ss119994833 | g.17918T > G2 | T | 24.3 | Â |
12 | ss119994840 | g.18059C > T2 | T | 22.4 | Silent4 |
13 | ss119994835 | g.18308G > A2 | G | 8.5 | Silent4 |
14 | ss119994836 | g.18390A > T2 | T | 13.4 | L132M4 |
15 | ss115456958 | g.3C > T3 | C | 13.3 | Â |
16 | ss115456962 | g.152T > C3 | T | 21.9 | Â |
17 | ss115456969 | g.1104C > T3 | C | 8.3 | Â |
18 | ss119994818, ss119994835 | g.1456C > G2, g.18308G > A2 | CG | 8.5 | Â |
19 | ss119994818, ss119994819 | g.1456C > G2, g.1477C > T2 | CT | 23.3 | Â |
20 | ss115456954, ss119994833, ss119994836 | g.986A > G1, g.17918T > G2, g.18390A > T2 | GTT | 11.6 | Â |
21 | ss119994796, ss119994806 | g.598T > C2, g.918A > G2 | CA | 23.6 | Â |
22 | ss119994796, ss119994806 | g.598T > C2, g.918A > G2 | TG | 14.3 | Â |