From: Association analysis of PRNP gene region with chronic wasting disease in Rocky Mountain elk
Sequence variant | Reagent Role | Oligonucleotide |
---|---|---|
g.655C > T2 | Primer | GCCTGGACTCCACCTTAGG |
 | Primer | CGATGAGTAACCTGGATACGATCAA |
 | Probe4 | TTCTGTTGTCGTTTCCT |
 | Probe5 | TCTGTTGTCATTTCCT |
g.1131C > G2 | Primer | GCTACAACAGACTGACTGGATAGAA |
 | Primer | GGAATGAAGATGATTCAGTAATGGAAATGG |
 | Probe4 | CCAGTTAGAAATCAGTATTA |
 | Probe5 | CCAGTTAGAAATGAGTATTA |
g.18390A > T2 | Primer | GCAGCTGGAGCAGTGGTA |
 | Primer | CAAAATGTATAAGAGGCCTGCTCATG |
 | Probe4 | TTCCCAGCATGTAGCC |
 | Probe5 | CCCAGCAAGTAGCC |
g.1456C > G2 | Primer | GGAGCCTCTTGCCCATAACAA |
 | Primer | AGAAAACAGGTGTTAGAGGGATCATATACA |
 | Probe4 | ATTTATGCTGGGTCAATG |
 | Probe5 | TTATGCTGCGTCAATG |
g.17361G > A2 | Primer | TCTGTGCCAGGCTCTGC |
 | Primer | AGGGAATGAGTCTCTTTTGTTTGCT |
 | Probe4 | CCTGGCCCACTAAGA |
 | Probe5 | CTGGCCCGCTAAGA |
g.1104C > T3 | Primer | CCATGTGGAGGCCAGAAATCC |
 | Primer | GATGCCAGAAGAGTTTACAGAGACA |
 | Probe4 | CTGGAGGTGGGAAAC |
 | Probe5 | CTGGAGGTAGGAAAC |
g.986A > G1 | Primer | ATCCCCTACCTATGACTTTCAGACA |
 | Primer | TCCCCATAACCCGGAATCCT |
 | Probe4 | ATCATAGGCTACTACCTCATT |
 | Probe5 | TAGGCTACTGCCTCATT |
g.371T > C1 | Primer | GGACTGTCTAGATGAGCCAAACAT |
 | Primer | AGAGTCCCAGTTGCAGCTTAG |
 | Probe4 | AGGATGACCGAAATAT |
 | Probe5 | AGGATGACCAAAATAT |
g.18308G > A2 | Primer | CACATGGTGGTGGAGGCT |
 | Primer | GCTCCTGCCACATGCTTCA |
 | Probe4 | TCAGTGGAACAAACCCAGT |
 | Probe5 | AGTGGAACAAGCCCAGT |