Query Sequences | Partitioned | SIMT | |||||||
---|---|---|---|---|---|---|---|---|---|
 |  | 10-2 k | 20-2 k | 40-3 k | 10-2 k | ||||
Query | Length | Time | GCUPS | Time | GCUPS | Time | GCUPS | Time | GCUPS |
P02232 | 144 | 1.58 | 13.3 | 1.41 | 14.9 | 1.40 | 15.0 | 1.38 | 15.2 |
P05013 | 189 | 1.80 | 15.4 | 1.66 | 16.7 | 1.65 | 16.8 | 1.75 | 15.8 |
P14942 | 222 | 2.01 | 16.1 | 1.84 | 17.6 | 1.82 | 17.8 | 2.00 | 16.2 |
P07327 | 375 | 3.97 | 13.8 | 3.64 | 15.1 | 3.51 | 15.6 | 3.35 | 16.4 |
P01008 | 464 | 4.57 | 14.8 | 4.20 | 16.1 | 4.03 | 16.8 | 4.05 | 16.7 |
P03435 | 567 | 5.87 | 14.1 | 5.38 | 15.4 | 5.28 | 15.7 | 4.94 | 16.4 |
P42357 | 657 | 6.64 | 14.5 | 6.16 | 15.6 | 5.97 | 16.1 | 5.00 | 16.6 |
P21177 | 729 | 6.92 | 15.4 | 6.40 | 16.6 | 6.24 | 17.1 | 5.77 | 16.6 |
Q38941 | 850 | 7.98 | 15.6 | 7.37 | 16.9 | 7.35 | 16.9 | 6.35 | 16.8 |
P27895 | 1000 | 10.27 | 14.2 | 9.29 | 15.7 | 8.74 | 16.7 | 7.44 | 16.7 |
P07756 | 1500 | 15.07 | 14.5 | 14.08 | 15.6 | 13.43 | 16.3 | 8.64 | 16.9 |
P04775 | 2005 | 19.30 | 15.2 | 18.05 | 16.2 | 17.36 | 16.9 | 13.04 | 16.8 |
P19096 | 2504 | 22.89 | 16.0 | 21.49 | 17.0 | 21.19 | 17.3 | 17.50 | 16.7 |
P28167 | 3005 | 28.54 | 15.4 | 26.08 | 16.8 | 25.53 | 17.2 | 21.89 | 16.7 |
P0C6B8 | 3564 | 32.44 | 16.1 | 30.56 | 17.0 | 29.60 | 17.6 | 26.41 | 16.6 |
P20930 | 4061 | 40.47 | 14.7 | 36.07 | 16.5 | 34.31 | 17.3 | 31.35 | 16.6 |
P08519 | 4548 | 42.41 | 15.7 | 39.89 | 16.7 | 38.86 | 17.1 | 35.84 | 16.6 |
Q7TMA5 | 4743 | 42.44 | 16.3 | 39.36 | 17.6 | 39.30 | 17.6 | 40.18 | 16.5 |
P33450 | 5147 | 50.91 | 14.8 | 47.74 | 15.8 | 44.20 | 17.0 | 41.92 | 16.5 |
Q9UKN1 | 5478 | 55.46 | 14.4 | 49.49 | 16.2 | 46.66 | 17.2 | 45.62 | 16.5 |