Table 1 Sample Gene Ontology terms and GO Trimming results

1

GO:0031532

actin cytoskeleton reorganization

0.00338

5

12

2

GO:0009620

response to fungus

3.04E-09

10

12

3

GO:0006037

cell wall chitin metabolic process

3.04E-09

10

12

3

GO:0044036

cell wall macromolecule metabolic process

3.04E-09

10

12

3

GO:0010383

cell wall polysaccharide metabolic process

3.04E-09

10

12

4

GO:0003796

lysozyme activity

3.04E-09

10

12

GO:0001101

response to acid

3.04E-09

10

12

5

GO:0046578

regulation of Ras protein signal transduction

6.77E-04

6

13

5

GO:0051056

regulation of small GTPase mediated signal transduction

6.77E-04

6

13

6

GO:0008061

chitin binding

1.21E-08

10

13

7

GO:0006032

chitin catabolic process

1.21E-08

10

13

3

GO:0006030

chitin metabolic process

1.21E-08

10

13

8

GO:0004568

chitinase activity

1.21E-08

10

13

9

GO:0003746

translation elongation factor activity

0.00727

5

14

3

GO:0071554

cell wall organization or biogenesis

3.86E-08

10

14

GO:0008643

carbohydrate transport

0.0226

5

18

10

GO:0005885

Arp2/3 protein complex

0.0226

5

18

9

GO:0006414

translational elongation

0.00485

6

18

11

GO:0045165

cell fate commitment

0.0284

5

19

GO:0035091

phosphoinositide binding

0.00652

6

19

7

GO:0006026

aminoglycan catabolic process

2.29E-06

10

19

12

GO:0030126

COPI vesicle coat

0.0140

6

22

12

GO:0030663

COPI coated vesicle membrane

0.0140

6

22

7

GO:0000272

polysaccharide catabolic process

1.36E-06

11

22

13

GO:0003007

heart morphogenesis

0.0175

6

23

12

GO:0030660

Golgi-associated vesicle membrane

0.0215

6

24

12

GO:0030137

COPI-coated vesicle

0.0215

6

24

14

GO:0005859

muscle myosin complex

0.0215

6

24

14

GO:0016460

myosin II complex

0.0215

6

24

15

GO:0001725

stress fiber

0.00546

7

24

15

GO:0032432

actin filament bundle

0.00546

7

24

15

GO:0042641

actomyosin

0.00697

7

25

3, 7

GO:0006022

aminoglycan metabolic process

1.04E-05

11

26

16

GO:0030239

myofibril assembly

0.0134

7

28

16

GO:0031032

actomyosin structure organization

0.00441

8

29

17

GO:0016363

nuclear matrix

0.00134

9

30

17

GO:0034399

nuclear periphery

0.00174

9

31

18

GO:0007586

digestion

4.24E-06

13

33

19

GO:0001726

ruffle

0.0146

8

35

20

GO:0005529

sugar binding

6.58E-06

14

39

3, 7

GO:0005976

polysaccharide metabolic process

2.20E-04

12

40

GO:0005938

cell cortex

0.0407

8

42

16

GO:0010927

cellular component assembly involved in morphogenesis

0.0174

9

43

21

GO:0022627

cytosolic small ribosomal subunit

1.20E-05

15

46

22

GO:0004322

ferroxidase activity

4.18E-07

17

46

22

GO:0016724

oxidoreductase activity, oxidizing metal ions, oxygen as acceptor

4.18E-07

17

46

6

GO:0030247

polysaccharide binding

7.26E-05

14

47

6

GO:0001871

pattern binding

7.26E-05

14

47

22

GO:0016722

oxidoreductase activity, oxidizing metal ions

1.18E-06

17

49

23

GO:0022625

cytosolic large ribosomal subunit

0.0428

9

50

7

GO:0016052

carbohydrate catabolic process

6.10E-05

15

52

4, 8

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

5.05E-05

16

57

21

GO:0015935

small ribosomal subunit

1.58E-05

17

58

24

GO:0005200

structural constituent of cytoskeleton

0.0210

11

59

23

GO:0015934

large ribosomal subunit

0.0328

11

63

19

GO:0031252

cell leading edge

0.0364

11

64

4, 8

GO:0016798

hydrolase activity, acting on glycosyl bonds

2.74E-04

16

65

6, 20

GO:0030246

carbohydrate binding

1.64E-04

18

75

2

GO:0051707

response to other organism

0.00451

15

76

21, 23

GO:0022626

cytosolic ribosome

9.78E-06

24

98

25

GO:0016791

phosphatase activity

0.0314

17

111

16

GO:0032989

cellular component morphogenesis

0.0160

18

111

25

GO:0016311

dephosphorylation

0.0365

17

113

26

GO:0003735

structural constituent of ribosome

3.52E-06

28

118

21, 23

GO:0033279

ribosomal subunit

5.92E-06

28

121

1, 16

GO:0030036

actin cytoskeleton organization

0.00597

21

124

21, 23

GO:0044445

cytosolic part

3.27E-05

27

125

7

GO:0009057

macromolecule catabolic process

0.0131

21

133

25

GO:0042578

phosphoric ester hydrolase activity

0.0457

20

142

GO:0006955

immune response

0.0486

20

143

1, 16

GO:0030029

actin filament-based process

0.0189

22

146

27

GO:0005615

extracellular space

0.00507

24

146

21, 23

GO:0005840

ribosome

8.61E-05

29

146

19

GO:0042995

cell projection

0.00775

24

151

10, 14, 15

GO:0015629

actin cytoskeleton

0.0282

24

169

1, 16

GO:0007010

cytoskeleton organization

0.0115

29

198

3, 7

GO:0005975

carbohydrate metabolic process

0.0121

31

216

9

GO:0006412

translation

4.07E-04

38

229

27

GO:0044421

extracellular region part

0.0135

33

235

21, 23

GO:0030529

ribonucleoprotein complex

0.00101

43

281

24, 26

GO:0005198

structural molecule activity

2.31E-05

53

316

21, 23

GO:0005829

cytosol

0.00275

47

330

27

GO:0005576

extracellular region

0.00841

46

341

9

GO:0003723

RNA binding

5.39E-04

53

356

9

GO:0003676

nucleic acid binding

0.00866

73

588

13, 28

GO:0007275

multicellular organismal development

0.0203

89

764

10, 14, 15, 21, 23

GO:0043232

intracellular non-membrane-bounded organelle

0.0186

95

819

10, 14, 15, 21, 23

GO:0043228

non-membrane-bounded organelle

0.0186

95

819

11, 13, 16, 28

GO:0032502

developmental process

0.0307

105

934

18, 28

GO:0032501

multicellular organismal process

0.0273

119

1067