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Table 1 Barley HvNACs

From: Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved functions compared to both monocots and dicots

Gene

Accession#

Length

Group

Putative orthologues (percent identity)

HvNAC001

AK250475

Full

d-8

BdNAC067(91), ONAC060(84)

HvNAC002

AK249396

Full

b-2

BdNAC048(82), ONAC040(77)

HvNAC003

AK249102

Full

a-8

BdNAC001(85), ONAC002(81)

HvNAC004

AM500853

Full

a-8

BdNAC041(82), ONAC068/OsNAC4(75)

HvNAC005

AK251058

Full

a-6

BdNAC023(82), ONAC058(70)

HvNAC006/HvNAC6 [44]

AM500854

Full

a-9

BdNAC043(85), ONAC048/OsNAC6(83), ANAC002/ATAF1(65)

HvNAC007

AK249749

Full

b-6

BdNAC052(73), ONAC037(62)

HvNAC008/HvSF6 [66]

FR821737

Full

d-9

ONAC015(60)

HvNAC009

FR819761

Full

d

no close homologues

HvNAC010

FR821754

Full

f-2

BdNAC080(75), ONAC001(60)

HvNAC011

AK251493

Full

b-10

BdNAC081(93), ONAC109(90), ANAC057(72)

HvNAC012

FR819762

Full

e-4

BdNAC044(80), ONAC075(76), ANAC034/LOV1(51)

HvNAC013

AK376297

Full

d-9

BdNAC024(84), ONAC039(74)

HvNAC014

FR821738

Full

d-10

BdNAC093(77), ONAC004/OsNAC2(77)

HvNAC015

FR821739

Full

d-8

BdNAC053(78), ONAC104(76)

HvNAC016

AK366470

Full

b-2

BdNAC065(75), ONAC070(69)

HvNAC017

FR821740

Full

d

no close homologues

HvNAC018

FR821741

Full

d

no close homologues

HvNAC019

FR819764

Partial

d

-

HvNAC020

FR821742

Full

a-9

BdNAC071(88), ONAC009/OsNAC5(82), ANAC081/ATAF2(57)

HvNAC021

AK370287

Full

d-2

BdNAC003(90), ONAC006(73)

HvNAC022

AK365398

Full

d-8

BdNAC009(87), ONAC011(82), ANAC022(51)

HvNAC023

FR821745

Full

a-6

BdNAC005(77), ONAC103(73)

HvNAC024

FR821746

Full

d

no close homologues

HvNAC025

AK364002

Full

d-7

ONAC032 (63)

HvNAC026

FR819767

Full

a-4

BdNAC091(83), ONAC079(79), ANAC104/XND1(56)

HvNAC027

AK368213

Full

a-6

BdNAC090(70), ONAC131(63)

HvNAC028/IDEF2 [67]

AB362161

Full

b-3

BdNAC032(72), ONAC036(64)

HvNAC029/HvNAM-1 [12]

EU908210

Full

a-5

BdNAC006(81), ONAC010(72)

HvNAC030

DQ869679

Full

a-5

BdNAC006(81), ONAC010(73)

HvNAC031/HSINAC [43]

AY672069

Full

e-4

BdNAC050(79)

HvNAC032

AK248480

Full

d-7

BdNAC096(82), ONAC008(76)

HvNAC033

AK248449

Full

c-3

ONAC029(79), BdNAC051(73), ANAC043/NST1(57)

HvNAC034

AK249120

Full

c-3

ONAC007(72)

HvNAC035

FR821748

Full

b-4

BdNAC029(77), ONAC074/OsNAC8(61)

HvNAC036

AL505464

Partial

d-9

-

HvNAC037

AK371156

Full

d-9

no close homologues

HvNAC038

BY847894

Partial

c-4

-

HvNAC039

AK370035

Full

g-9

BdNAC038(91), ONAC073(84)

HvNAC040

AK361879

Full

h-3

no close homologues

HvNAC041

FR821751

Full

f-2

BdNAC061(68), ONAC005(62)

HvNAC042

AK361273

Full

h

BdNAC007(70)

HvNAC043

GH216054

Partial

h-5

-

HvNAC044

AK364683

Full

f-3

ONAC041 (65)

HvNAC045

BF259201

Full

h-5

no close homologues

HvNAC046

AK252960

Full

h

BdNAC076(90)

HvNAC047

CV057263

Partial

h

-

HvNAC048

AK355552

Full

b-1

ONAC042(63)

  1. List of barley HvNACs with EMBL/GenBank accession numbers. The length of each established gene transcript is given as either full or partial coding sequence as compared to wheat or Brachypodium homologues. Phylogenetic grouping was performed according to Shen et al. [2] and was based only on the NAC domain of the encoded protein. For HvNACs with no close rice or Arabidopsis homologues, only the subfamily is noted. The putative orthologues are based on full-length protein alignments and the presence of conserved motifs in the C-terminal. No orthologues are listed for the partial length proteins. The percent identity, on full-length amino acid level, between the barley NAC protein and the orthologue in question is given in parenthesis. Numbers in square brackets in the gene name column represent references in the bibliographic reference list.
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BMC Research Notes

ISSN: 1756-0500

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