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Table 2 Amino acid substitutions of Salmonella enteritidis PT13a

From: Single nucleotide polymorphisms that differentiate two subpopulations of Salmonella enteritidis within phage type

substitution

Number in 21027b

Number in 21046

ap to bp

0

0

bp to ap

0

0

np to ap

1

0

np to bp

1

0

ap to nn

2

2

nn to bp

2

3

bp to bp

2

1

np to np

2

2

ap to ap

3

1

ap to np

3

1

bp to nn

4

3

bp to np

4

5

nn to ap

4

1

nn to np

6

9

np to nn

7

4

nn to nn

15

12

Total

56

44

  1. a Classes of amino acids are: nn, neutral non-polar; np, neutral polar; ap, acidic polar; bp, basic polar. For greater detail about amino acid polarity refer to supplementary material (S1, because polar amino acids are not classified as weak or strong in this table.
  2. bincludes AA change in ydcZ, which also has a deletion.