From: Medusa: A tool for exploring and clustering biological networks
Layout algorithms | Clustering Algorithms | Features |
---|---|---|
Grid | Predefined clustering | Multi-edged connections |
Random | k-Means | Curves, Lines, Arrows |
Circular | Spectral | Interactivity |
Hierarchical | Affinity Propagation | Compatibility with other tools |
Force-Directed | Â | Offered as an applet |
Spring Embedding | Â | Collapse/Expand node |
Distance geometry | Â | Search functionality |
Parallel Coordinates | Â | Color schemes |
 |  | Isolation of subset of edges |