Skip to main content

Table 1 Features of Medusa

From: Medusa: A tool for exploring and clustering biological networks

Layout algorithms

Clustering Algorithms

Features

Grid

Predefined clustering

Multi-edged connections

Random

k-Means

Curves, Lines, Arrows

Circular

Spectral

Interactivity

Hierarchical

Affinity Propagation

Compatibility with other tools

Force-Directed

 

Offered as an applet

Spring Embedding

 

Collapse/Expand node

Distance geometry

 

Search functionality

Parallel Coordinates

 

Color schemes

  

Isolation of subset of edges