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Table 3 Insertion/deletion occurred in multiple reads mostly at homopolymeric regions of 2-3 nucleotide length as well as at the random sites, for example, shown for run 1 of control antibody #1.

From: 454 antibody sequencing - error characterization and correction

Number of Sequences

Homopolymeric region?

Description of variation

6 sequences

yes: 3G in place of 4

1 deletion

7 sequences

yes: 4A in place of 3

1 insertion

8 sequences

yes: 4T in place of 3

1 insertion

9 sequences

yes: 4G in place of 2; no: 1 random G

2 + 1 insertion

11 sequences

yes: 3G in place of 4

1 deletion

21 sequences

yes: 4G in place of 3

1 insertion

22 sequences

yes: 4G in place of 3

1 insertion

28 sequences

no

1 deletion

31 sequences

yes: 4C in place of 3

1 insertion

32 sequences

yes: 3G in place of 2; no: 1 random G

1 + 1 insertion

42 sequences

yes: 3G in place of 2

1 insertion

49 sequences

no

1 deletion