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Table 2 Summary statistics for the SNPs detected in the H. midae library.

From: Transcriptome characterization of the South African abalone Haliotis midae using sequencing-by-synthesis

SNP type

Allele variations

First analysis Count/Percentage

Second analysis Count/Percentage

Transition

A↔G

3319/28.2%

262/31.2%

 

C↔T

3412/29.0%

267/31.8%

Transversion

A↔C

1312/11.1%

71/8.5%

 

A↔T

1777/15.1%

115/13.7%

 

G↔C

741/6.3%

47/5.6%

 

G↔T

1216/10.3%

77/9.2%

  1. For each type of SNP, the number and percentage for the two analyses carried out with different parameters (see Material and Methods section) are reported.