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Table 1 Comparison between raw data and preprocessed reads

From: Allele discovery of ten candidate drought-response genes in Austrian oak using a systematically informatics approach based on 454 amplicon sequencing

Pool

      
  

Received

  

Preprocessed

 
 

Number of reads

Base pairs (Mbp)

Average length

Number of reads

Base pairs (Mbp)

Average length

Oak 1

30,207

5.72

189.45

22,826

5.11

200.96

Oak 2

38,797

8.55

220.43

29,290

7.71

239.25

Oak 3

31,731

6.70

211.29

24,336

6.08

229.92

Oak 4

31,874

7.63

239.31

26,063

7.10

248.58

Oak 5

33,645

8.68

258.07

30,619

8.38

180.76

Oak 6

30,008

6.95

231.72

23,650

6.39

246.25

Oak 7

29,307

7.07

241.34

23,909

6.61

252.14

Oak 8

28,061

6.49

231.16

20,927

5.61

244.92

Total

253,630

57.80

227.85

201,620

52.98

230.35

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BMC Research Notes

ISSN: 1756-0500

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