Classification of predicted genes in the consensus set of sequences and the sets of orphan sequences based on their sequence matching results. Blue: predicted genes matching sequences that have an assigned molecular function. Red: predicted genes matching sequences that lack assigned molecular function. Green: predicted genes not matching any known sequence from other species. Purple: predicted genes matching genes from other species considered as viral, transposable elements or related sequences. Consensus: genes of the 12Xv1 shared with another set. 12Xv1: genes unique to the 12X coverage genome sequencing version 1 of the gene prediction. 8X: genes unique to the 8X coverage genome sequencing. DFCIv5: mRNA sequences unique to the DFCI gene index v5. GrapeGen: mRNA sequences unique to mRNA sequences used to construct the GrapeGen Affymetrix microarrays. 12Xv0: genes unique to the 12Xv0.