Gene symbol | Name | Primer sequences 5’ to 3’ | Exons | Amplicon size (bp) | Function | Ensembl or GenBank accession no. |
---|---|---|---|---|---|---|
Sense and antisense | ||||||
ACTB | β-Actin | tgcgttacaccctttcttgaca | 5 | 73 | Cytoskeletal protein | From ref. [31] |
acaaagccatgccaatctcat | ||||||
ATP5B | ATP synthase, F1 complex β subunit | gatcaatttaaaagatgctacctcgaa | 5 and 6 | 68 | ATP synthesis | DQ403103 |
caccaggcggttcattcatt | ||||||
ATP6 | Adenosine triphosphatase 6 | cccactatgagcagcaactgtaa | 1 | 67 | ATP metabolism | NC_000884 |
gaagtgggctagggatgcttt | ||||||
B2M | β2-Microglobulin | tggtgcatgctgcctttaca | 2 | 64 | Cell surface molecule component | NM_001172856 |
gtgatgtgtgaaactctgcaagaa | ||||||
CFL1 | Cofilin 1 | ttccaaggatgccatcaaaaa | 3 and 4 | 65 | Actin modification | ENSCPOT00000008138 |
cgtagcaatttgcctgtaattcg | ||||||
CLTC | Clathrin | caattcgttttcaggagcatctc | 1 and 2 | 64 | Coated vesicle formation protein | ENSCPOT00000005567 |
aagccaatgtttgctgggtta | ||||||
CTBP1 | C-terminal binding protein 1 | tctcatcaacgacttcactgtcaa | 4 and 5 | 61 | Transcriptional repressor phosphoprotein | ENSCPOT00000019529 |
ggccgtgttcaccaggaa | ||||||
GAPDH | Glyceraldehyde-3-phosphate dehydrogenase | tcagagggctccctcaaag | 2 | 70 | Glycolytic enzyme | From ref. [30] |
cgctgttgaagtcacaggac | ||||||
HMBS | Hydroxymethyl-bilane synthase | cctgggttggcagaacaga | 9 and 10 | 66 | Heme biosynthesis | ENSCPOT00000006534 |
tggcccacagcatacatacag | ||||||
PPIB | Cyclophilin B | gggcctaaagtcaccgtcaa | 1 and 2 | 63 | Protein folding catalyst | ENSCPOT00000000258 |
ccggcccacatcttcatct | ||||||
RPLP0 | Ribosomal protein, large, P0 | atgctgctggccaataaggt | 3 and 4 | 64 | Protein synthesis | ENSCPOT00000019555 |
tgacttcacatggtgcaatgg | ||||||
SDHA | Succinate dehydrogenase, subunit A | gatgccatccattacatgacaga | 4 and 5 | 67 | Citric acid cycle enzyme | DQ402978 |
gcatgccataattttctagctcaa | ||||||
TBP | TATA-binding protein | acttgacctaaagacaattgcacttc | 5 and 6 | 65 | Transcription factor | ENSCPOT00000001200 |
cagcaaaccgcttgggatta | ||||||
TFRC | Transferrin receptor | gaccttccagtcttcggtcatg | 8 and 9 | 68 | Iron transport | S81327 |
aaagaagggaacccaggtgtataa | ||||||
TPT1 | Tumor protein, translationally controlled 1 | ccttgctaatttcaaaaactatcagttc | 4 and 5 | 67 | Â | EU330893 |
agcaaccatgccatctggat | ||||||
PTGS2 | Cyclooxygenase-2 | ctgcgcaatgcaatcatga | 3 and 4 | 67 | Prostaglandin synthesis | Y07896 |
agttggtggactgtcgatcaga |