From: A fast approach to global alignment of protein-protein interaction networks
(a) D.melanogaster vs S.cerevisiae | ||||
---|---|---|---|---|
Fly | Yeast | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 535 | 17.00% | 324 | 43.00% |
iso_hungarian | 457 | 15.20% | 1066 | 44.00% |
mat3_auction | 490 | 15.40% | 1132 | 38.30% |
mat3_greedy | 448 | 17.00% | 1102 | 44.00% |
(b) D.melanogaster vs H.sapiens | ||||
Fly | Human | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 1067 | 30.10% | 191 | 9.00% |
iso_hungarian | 974 | 31.50% | 671 | 14.30% |
mat3_auction | 1020 | 27.00% | 519 | 12.50% |
mat3_greedy | 1029 | 30.80% | 670 | 17.00% |
(c) D.melanogaster vs E.coli | ||||
Fly | Bacterium | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 41 | 11.63% | 66 | 16.60% |
iso_hungarian | 60 | 10.38% | 175 | 29.35% |
mat3_auction | 90 | 9.80% | 236 | 32.00% |
mat3_greedy | 56 | 10.73% | 235 | 32.58% |
(d) H.sapiens vs S.cerevisiae | ||||
Human | Yeast | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 971 | 31.74% | 406 | 17.97% |
iso_hungarian | 1010 | 31.27% | 1063 | 41.76% |
mat3_auction | 1064 | 28.40% | 1083 | 40.16% |
mat3_greedy | 989 | 33.33% | 1095 | 46.14% |
(e) S.cerevisiae vs E.coli | ||||
Yeast | Bacterium | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 419 | 46.10% | 63 | 15.00% |
iso_hungarian | 359 | 46.60% | 231 | 38.24% |
mat3_auction | 400 | 40.72% | 274 | 35.75% |
mat3_greedy | 378 | 44.22% | 289 | 35.37% |
(f) E.coli vs H.sapiens | ||||
Bacterium | Human | |||
Method | TPR | TNR | TPR | TNR |
iso_greedy | 52 | 16.77% | 472 | 29.56% |
iso_hungarian | 158 | 35.63% | 386 | 28.40% |
mat3_auction | 252 | 32.96% | 557 | 34.80% |
mat3_greedy | 219 | 36.00% | 444 | 29.73% |