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Table 3 Analyses of interactions of differentially expressed miRNAs and mRNAs, considering T1D* and T2D* patients

From: Identifying common and specific microRNAs expressed in peripheral blood mononuclear cell of type 1, type 2, and gestational diabetes mellitus patients

mRNA

microRNA

#DIANAmT

#miRanda

#miRDB

#miRWalk

#RNAhybrid

#Targetscan

BATF2(⬇)

miR-342-3p(⬇)

1

1

0

1

1

1

C1orf87(⬆)

miR-342-3p(⬇)

0

1

0

1

0

1

PANX2(⬆)

miR-342-3p(⬇)

1

1

0

1

1

1

PDE4D(⬆)

miR-342-3p(⬇)

0

0

0

1

0

1

PITPNM2(⬆)

miR-342-3p(⬇)

1

1

0

1

1

1

RASGEF1B(⬆)

miR-342-3p(⬇)

1

1

0

1

1

1

SPG20(⬇)

miR-342-3p(⬇)

1

1

0

1

1

1

ZSWIM3(⬇)

miR-342-3p(⬇)

1

1

0

1

1

1

ANKRD22(⬇)

miR-720(⬇)

0

1

0

1

1

1

FBLN2(⬆)

miR-27a(⬆)

1

1

0

1

1

1

GPR125(⬆)

miR-27a(⬆)

1

1

0

1

1

1

IFNG(⬇)

miR-27a(⬆)

1

1

0

1

1

1

PITPNM2(⬆)

miR-27a(⬆)

1

1

0

1

1

1

SNF1LK(⬆)

miR-27a(⬆)

1

1

1

1

1

1

ABCD3(⬆)

miR-21(⬆)

1

1

1

1

1

1

CA1(⬇)

miR-21(⬆)

0/1

0/1

0

1

0

1

CCL20(⬆)

miR-21(⬆)

1

1

1

1

1

1

ABCD3(⬆)

miR-130a(⬆)

1

1

0

1

1

0

ABCD3(⬆)

miR-144(⬇)

0

1

0

0

0

0

MPHOSPH6(⬆)

miR-144(⬇)

1

1

1

1

1

1

KRT2(⬆)

miR-140-3p(⬇)

1

1

0

1

1

1

RASGEF1B(⬆)

miR-140-3p(⬇)

1

1

0

1

1

1

STK35(⬆)

miR-140-3p(⬇)

1

1

0

1

1

1

IL1A(⬆)

miR-150(⬆)

1

1

1

1

1

1

ADAMTSL4(⬇)

miR-223(⬆)

1

0

0

1

1

1

CXCL3(⬆)

miR-223(⬆)

0

0

0

1

0

0

SLC11A2(⬆)

miR-223(⬆)

1

1

1

1

1

1

ADAMTSL4(⬇)

miR-451(⬆)

1

1

0

1

1

0

CRABP1(⬆)

miR-451(⬆)

1

1

0

1

1

0

DDX3Y(⬆)

miR-451(⬆)

1

1

0

1

0

1

SETD5(⬇)

miR-451(⬆)

1

1

0

1

1

1

SLC16A3(⬆)

miR-451(⬆)

1

1

0

1

1

1

ANKRD22(⬇)

miR-30e(⬇)

1

1

1

1

1

1

GPR125(⬆)

miR-30e(⬇)

1

1

1

1

1

1

IL1A(⬆)

miR-30e(⬇)

1

1

1

1

1

1

IRS2(⬆)

miR-30e(⬇)

1

1

0

1

1

1

PITPNM2(⬆)

miR-30e(⬇)

1

1

1

1

1

1

SETD5(⬇)

miR-30e(⬇)

0

1

1

1

1

1

SNAI1(⬆)

miR-30e(⬇)

1

1

1

1

1

1

ZNF507(⬆)

miR-30e(⬇)

1

1

0

1

1

1

ID1(⬆)

miR-1260(⬇)

0

1

0

1

1

1

STK35(⬆)

miR-1308(⬇)

0

1

0

1

1

1

SOD2(⬆)

miR-142-5p(⬇)

1

1

0

1

1

0

TRIM36(⬇)

miR-142-5p(⬇)

1

0

0

0

0

1

C1orf25(⬇)

let-7a(⬆)

1

1

0

1

1

1

C9orf40(⬇)

let-7a(⬆)

0

1

0

1

1

1

MPHOSPH6(⬆)

let-7a(⬆)

1

1

0

1

1

1

PARS2(⬇)

let-7a(⬆)

1

1

1

1

1

1

TBKBP1(⬆)

let-7a(⬆)

1

1

0

1

1

1

TSPYL5(⬆)

let-7a(⬆)

0

1

0

1

1

1

C9orf40(⬇)

let-7e(⬆)

0

1

0

1

1

1

IRS2(⬆)

let-7e(⬆)

1

1

0

1

1

1

MPHOSPH6(⬆)

let-7e(⬆)

1

1

0

1

1

1

PARS2(⬇)

let-7e(⬆)

1

1

1

1

1

1

TBKBP1(⬆)

let-7e(⬆)

1

1

0

1

1

1

TSPYL5(⬆)

let-7e(⬆)

0

1

0

1

1

1

C1orf25(⬇)

let-7f(⬆)

0

1

0

1

0

1

C9orf40(⬇)

let-7f(⬆)

0

1

0

1

1

1

MPHOSPH6(⬆)

let-7f(⬆)

1

1

0

1

1

1

PARS2(⬇)

let-7f(⬆)

1

1

0

1

0

1

TBKBP1(⬆)

let-7f(⬆)

1

1

0

1

0

1

TSPYL5(⬆)

let-7f(⬆)

0

1

0

1

1

1

C1orf25(⬇)

let-7 g(⬆)

1

1

0

1

1

1

MPHOSPH6(⬆)

let-7 g(⬆)

1

1

0

1

1

1

PARS2(⬇)

let-7 g(⬆)

1

1

1

1

1

1

TBKBP1(⬆)

let-7 g(⬆)

1

1

0

1

1

1

TSPYL5(⬆)

let-7 g(⬆)

0

1

0

1

1

1

C1orf96(⬆)

miR-29b(⬇)

1

1

1

1

1

1

DFNB31(⬆)

miR-29b(⬇)

1

1

0

1

1

1

ID1(⬆)

miR-29b(⬇)

1

1

0

1

1

1

IFNG(⬇)

miR-29b(⬇)

1

1

0

1

1

1

PER1(⬆)

miR-29b(⬇)

1

1

0

1

1

1

PITPNM2(⬆)

miR-29b(⬇)

1

1

0

1

1

1

KRT2(⬆)

miR-20b(⬆)

1

1

0

1

1

1

TRIM36(⬇)

miR-20b(⬆)

1

1

0

1

1

1

MPHOSPH6(⬆)

miR-199a-3p(⬆)

1

1

1

1

1

1

TRIM36(⬇)

miR-199a-3p(⬆)

1

1

1

1

1

1

EREG(⬆)

miR-142-3p(⬇)

1

1

0

1

1

1

RASGEF1B(⬆)

miR-103(⬆)

1

1

0

1

1

1

TBKBP1(⬆)

miR-103(⬆)

1

1

0

1

0

1

  1. *T1D – type 1 diabetes and T2D – type 2 diabetes.
  2. #Algorithms for mRNA/miRNA interactions.
  3. Number 1 represents predicted interaction and number 0 indicates non-predicted interaction.
  4. ⬆ mRNA or miRNA upregulation and ⬇mRNA or miRNA downregulation.