From: STINGRAY: system for integrated genomic resources and analysis
Organism | Genome size | SRA1 | Sequencing technology | Total reads | N° of contigs | Time of pre-assembly6 | Number of sequences with one GO-based annotations at least | |||
---|---|---|---|---|---|---|---|---|---|---|
MF2 | BP3 | CC4 | WA5 | |||||||
E. coli K12 | 4,7 Mb | SRR001354 | SOLiD | 25162805 | 11011 | 30 min | 1593 | 1577 | 1562 | 9328 |
N. meningitidis | 2 Mb | ERR015596 | Illumina | 5418859 | 4815 | 3 h 4 min | 1055 | 1055 | 995 | 2812 |
S. pneumoniae GA17457 | 2 Mb | SRR068304 | 454 GS FLX | 252646 | 11317 | 2 h 52 min | 5899 | 5942 | 5393 | 5340 |
P. papatasi | ~170 Mb | SRR066482 | 454 Titanium | 498629 | 9836 | 5 h 18 min | 554 | 553 | 458 | 9993 |