Forward primer | Forward primer sequence (5′ to 3′) | Reverse primer | Reverse primer sequence (5′ to 3′) | Amplicon length (bases) | Length of 5′ segment (bases) |
---|---|---|---|---|---|
for1 | CTGGAGGAGCCTTCCCTAC | rev1 | GTCGCGACTGCCGCTC | 94 | 43 |
for2 | CCTCGCATTGCTCAAGCACA | rev1 | as above | 145 | 43 |
for3 | CGCGACACGCCCATGT | rev1 | as above | 243 | 43 |
for4 | GCGGACATCGACGGCTATGT | rev1 | as above | 312 | 43 |
for4 lim* | AACGCGCGGACATCGACGGCTATGT | rev1 | as above | 317 | 43 |
for5 | GCGCATACGATTCTTCAAAAGGC | rev1 | as above | 978 | 43 |
for3 | as above | rev2 | ACGCCTTACGTATCGGATCG | 298 | 107 |
for6 | CTTCGGGCCACCGCTACTA | rev3 | TGTGCTGTGGGCCGTGCT | 300 | 149 |
for1 | as above | rev4 | TCACCGCGCCTTGCTCGT | 242 | 191 |
for2 | as above | rev4 | as above | 293 | 191 |
for3 | as above | rev4 | as above | 382 | 191 |
for7 | as above | rev4 | as above | 624 | 191 |
for5 | as above | rev4 | as above | 1126 | 191 |
for1 | as above | rev5 | CCTCGGGCGTTTCGATCAC | 323 | 272 |
for4 | as above | rev5 | as above | 541 | 272 |
for8 | as above | rev5 | as above | 878 | 272 |
for5 | as above | rev5 | as above | 1027 | 272 |
for8 | CCAATGCATGTCGGCTCGC | rev6 | ACACCTCTTGCACGGAACCG | 296 | 23** |
for9 | GACACAAGCCGCGAACTGAC | rev7 | CCCAATGTCCGACATAGCC | 295 | 95** |
for10 | GAGCATCTTCGCGCCATAG | rev8 | TGTCGCGCTCGTTCGCTG | 289 | 149** |
for7 | CCTTTGCCGTCAGCTTCCG | rev9 | TAGTAGCGGTGGCCCGAAG | 301 | 201** |
for11 | CAGTTGTCCCTGAAGCGCCT | rev10 | TTGAGCAATGCGAGGCTGC | 317 | 246** |