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Table 3 Newbler characterization for high coverage in silico IonTorrent dataset

From: FASTQSim: platform-independent data characterization and in silico read generation for NGS datasets

Reference accession

Num unique

Pct of all unique

Pct of

Pct coverage

Description

 

matching reads

matches

all reads

of reference

 

NC_000913.2

225797

98.04%

42.2%

97.50%

Escherichia coli str. K-12 substr. MG1655,

     

complete genome

gi |215104|gb |J02459.1

2872

1.26%

0.50%

98.72

Enterobacteria phage lambda, complete

     

genome, with codon substitution

EU496103.1

1543

0.70%

0.30%

100.0%

BioBrick cloning vector pSB3C5-I52001,

     

complete sequence