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Figure 1 | BMC Research Notes

Figure 1

From: SNPest: a probabilistic graphical model for estimating genotypes

Figure 1

Predicted SNPs on low depth diploid data from human chromosome 20. The Venn diagram shows the performance of the five genotypers used (SNPest without using the reference genome, FreeBayes, SAMtools with bcftools, GATK’s HaplotypeCaller and GeMS) and illustrates the overlap in predicted SNPs between every combination of methods.

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