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Table 2 Characterization of 10 microsatellite loci for S. droebachiensis using 96 individuals

From: New microsatellite loci for the green sea urchin Strongylocentrotus droebachiensis using universal M13 labelled markers

Locus

Repeat motif

F & R primer sequences 5’-3’*

Dye

Size range (bp)**

A

N

H o

H e

Strdro-97

(CA)11

F: GGTGCATCCATCCCGTAGTG

FAM

159-171

6

96

0.29

0.34

R: CTGCCCTGTAAGAGTGTGTG

Strdro-837***

(CA)11

F: GAGAGTGAATTGAATGTATCAAATGAG

Yakima Yellow

142-152

6

67

  

R: TTTATCCCACAGGACTCGGC

Strdro-849***

(AC)12

F: TGATACACGTCTGTGAAAACCC

ATTO 550

112-154

15

94

  

R: TTTGCTCCATCAGAAGTTCAC

Strdro-1051

(GA)11

F: GCGCTAGTCTGTTTCACCAC

ATTO 565

190-218

13

95

0.37

0.68

R: TCAAATTCCGCCGTTTAGGC

Strdro-4147

(GA)11

F: GTCAGACAAAGAGAGTGTGTGAG

FAM

75-115

15

84

0.30

0.82

R: GAGTATATGCCCGCCTCTCC

Strdro-7209

(CA)12

F: TGAACTGGCCACATTCCTCC

Yakima Yellow

128-158

9

82

0.40

0.41

R: ACTATGTGGGGGTAGATCCG

Strdro-5563

(ATGG)11

F: TGTTCAGCTGCCTGTCTCTG

ATTO 550

165-247

19

90

0.48

0.85

R: TCCTTTTGTTCATCCTTCCTTCC

Strdro-1356

(CA)12

F: AAAAGGTAACGTTCGCTCGC

ATTO 565

164-250

19

87

0.33

0.77

R: ATGATCCGTTCAGGAGGCAG

Strdro-7412

(GA)13

F: ACGATTGGGAGATTGAAAGTG

FAM

92-124

13

95

0.68

0.80

R: TCGCCACATACACACAAACG

Strdro-5950

(GT)11… (GT)12

F: GATTGAACCGTGTGCGAGAG

ATTO 565

96-152

19

89

0.44

0.89

R: CTACCTCCAACGACACACAC

  1. Number of alleles (A), number of individuals that amplified (N), observed heterozygosity (Ho), expected heterozygosity (He), *without M13 forward tail, **including the 18 bp M13 forward tail, ***acts as polysomic.