Table 8 True positive (TP) and true negative (TN) rates for reference values of target distance BT when predicted by AF, for E. coli
From: Next generation sequencing reads comparison with an alignment-free distance
Set used for | 0.105 | 0.15 | 0.205 | 0.25 | ||||
|---|---|---|---|---|---|---|---|---|
training the predictor | TP [%] | TN [%] | TP [%] | TN [%] | TP [%] | TN [%] | TP [%] | TN [%] |
EA | 97.00 | 99.09 | 96.38 | 98.78 | 95.43 | 98.66 | 94.61 | 98.60 |
EB | 99.08 | 98.14 | 98.90 | 97.43 | 98.54 | 96.92 | 97.97 | 96.78 |
EC | 100.00 | 96.11 | 99.98 | 94.75 | 99.98 | 93.48 | 99.96 | 92.56 |
ED | 98.67 | 98.47 | 98.30 | 97.93 | 97.95 | 97.49 | 97.49 | 97.21 |
EE | 98.31 | 98.69 | 97.42 | 98.39 | 97.15 | 97.97 | 96.57 | 97.84 |
EF | 95.46 | 99.45 | 94.15 | 99.35 | 93.46 | 99.19 | 91.43 | 99.35 |
Average | 98.09 | 98.32 | 97.52 | 97.77 | 97.09 | 97.29 | 96.34 | 97.06 |