miRNA gene1 | Source2 | Similar paralog3 | Clustered genes4 | CV Deep seq.5 | qPCR validation6 |
---|---|---|---|---|---|
ssa-miR-103-3p | Liang, P&L, Bar | no | not clustered | 99,3 | not included |
ssa-miR-106a-5p | P&L | yes | 25,93 | - | - |
ssa-miR-106b-5p | Liang | yes | 25,93 | - | - |
ssa-miR-107-3p | Bar | no | not clustered | 85,5 | yes |
ssa-miR139-5p | Bar | no | not clustered | 138,5 | not included |
ssa-miR-140-3p | Liang | no | not clustered | 172,6 (71,7) | yes |
ssa-miR-148a-3p | Bar | yes | not clustered | - | - |
ssa-miR-152-3p | Liang | no | not clustered | 122,4 | not included |
ssa-miR-15b-5p | Liang | yes | 16 | - | - |
ssa-miR-16a-5p | Liang, P&L, Appl | yes | 15 | - | - |
ssa-miR-17-5p | P&L | no | 18,19,20,92 | 77 | yes |
ssa-miR-183-5p | Bar | no | 96,182 | 286,3 | yes |
ssa-miR-18a-5p | Bar | yes | 17,19,20,92 | - | - |
ssa-miR-214-3p | Bar | no | not clustered | 82,6 | failed |
ssa-miR-23a-3p | Bar | yes | 24,27 | - | - |
ssa-miR-23b-3p | Bar | yes | 24,27 | - | - |
ssa-miR-24a-3p P&L | yes | 23,27 | - | - | Â |
ssa-miR-25-3p P&L | no | 93,106 | 53,6 | yes | Â |
ssa-miR-26a-5p | Bar | yes | 181 | - | - |
ssa-miR-26b-5p | Bar, Appl | yes | 181 | - | - |
ssa-miR-29a-3p | Liang | yes | 29b | - | - |
ssa-miR-29b-3p | Liang | yes | 29a | - | - |
ssa-miR-30b-5p | Bar | yes | 30e | - | - |
ssa-miR-30d-5p | Bar | yes | 30a | - | - |
ssa-miR-30e-5p | Liang | yes | 30d | - | - |
ssa-miR-301a-3p | Genov | yes | not | clustered | - |
ssa-miR-92a-3p | Liang, Bar, Appl | yes | 17,18,19,20 | - | - |
ssa-miR-93a-5p | Liang, P&L, Bar | no | 25,106 | 73,5 | yes |
ssa-miR-99-5p P&L | no | let-7c,7b | 127,6 | not | included |
ssa-let-7a-5p P&L | yes | 7f,100 | - | - | Â |
ssa-miR-455-5p | deep-seq | no | not clustered | 128 (48) | yes |
ssa-miR-210-5p | deep-seq | no | not clustered | 184,9 (89,9) | yes |