Isolation and full-length genome analysis of mosquito-borne Manzanilla virus from Yunnan Province, China

BMC Research Notes

Table 1 Nucleotide and amino acid homology in the sequences from DHL10M107 and other Orthobunya viruses

Genome segment and strain	% Nucleotide and amino acid sequence identities
Genome segment and strain	1	2	3	4	5	6
Small
1 DHL10M107		98.7	98.9	54.2	51.4	72.2
2 Manzanilla virus/VN04-2108	100		99.6	54.8	50.8	72
3 Oya virus/SC0806	100	100		54.9	51.1	72.2
4 Tahyna virus/XJ0708	43	43	43		54.4	52.8
5 Batai virus/MM2222	39.1	39.1	39.1	43.1		51.1
6 Oropouche virus/TRVL-9760	74	74	74	44.3	43.4
Medium
1 DHL10M107		97.7	97.2	46.2	48.9	59
2 Manzanilla virus/VN04-2108	99.2		97.5	46.1	48.9	58.9
3 Oya virus/SC0806	99.3	99.2		46.2	49	58.9
4 Tahyna virus/XJ0708	31.5	31.5	31.4		51.2	45.4
5 Batai virus/MM2222	32.7	32.8	32.8	43		48.5
6 Oropouche virus/TRVL-9760	52	52	52	30.5	31.3
Large
1 DHL10M107		96.3	92.6	55.9	56.1	65
2 Manzanilla virus/VN04-2108	99.5		93	56	56.2	65.1
3 Oya virus/SC0806	99	99.2		55.9	55.8	64.9
4 Tahyna virus/XJ0708	50.8	50.9	51.2		58.9	56.2
5 Batai virus/MM2222	48	48.2	48.3	54.2		55.3
6 Oropouche virus/TRVL-9760	31.7	32.2	31.7	23.8	23.3

The percent nucleotide sequence identities are in the upper right half of the matrix and the percent amino acid sequence identities are presented in the lower left half.
Virus strains in italics (homologous values) are members of Manzanilla virus complex of genus Orthobunyavirus.

ISSN: 1756-0500