Table 1 Summary of read mapping to organism-specific amplicons for a single sequence run
From: Targeted amplification for enhanced detection of biothreat agents by next-generation sequencing
Sample | Genome equivalents | Total reads mapped | Percent reads mapped (%) |
|---|---|---|---|
1e6 Frag | 1,000,000 | 7172 | 0.2 |
1e6 Amp | 1,000,000 | 5,261,163 | 95.7 |
1e4 Frag | 10,000 | 1338 | 0.02 |
1e4 Amp | 10,000 | 5,781,522 | 97.7 |
1e3 Frag | 1000 | 1021 | 0.01 |
1e3 Amp | 1000 | 5,037,307 | 97.6 |
1e2 Frag | 100 | 12,702 | 0.2 |
1e2 Amp | 100 | 5,194,177 | 96.3 |