Skip to main content

Table 1 Comparisons of the spread of counts of sequence similarity-based protein families across Chlorobium tepidum (‘cct’) and Pelodictyon phaeoclathratiforme (‘ppb’), for Uniprot protein sets

From: A comparison of the protein-coding genomes of two green sulphur bacteria, Chlorobium tepidum TLS and Pelodictyon phaeoclathratiforme BU-1

 

Unique for cct

Unique for ppb

1 copy for ppb, multiple copies for cct

1 copy for cct, multiple copies for ppb

Multiple copies for both species

1 copy for both species

Ungrouped proteins

Within conditions

 # of families

13

113

7

33

7

1468

–

 # of proteins

30

360

24

109

32

2936

1444

 # of cct proteins

30

–

17

33

15

1468

687

 Percentage of cct proteins (%)

1.33

–

0.756

1.47

0.667

65.2

30.5

 # of ppb proteins in the condition

–

360

7

76

17

1468

757

 Percentage of ppb proteins (%)

–

13.4

0.261

2.83

0.633

54.7

28.2

Within each family group

 Mean ± SD # of cct proteins

2.308 ± 0.63

–

2.429 ± 0.77

1 ± 0

2.143 ± 0.38

1 ± 0

–

 Mean ± SD # of ppb proteins

–

3.186 ± 2.32

1 ± 0

2.303 ± 0.81

2.429 ± 0.79

1 ± 0

–