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Table 1 Characteristics of eight microsatellite loci in the common raven Corvus corax

From: Development and characterization of microsatellite loci for common raven (Corvus corax) and cross species amplification in other Corvidae

Locus

Primer sequence (5′–3′)

Primer label

Repeat motif

Ta (°C)

n

HWE

K

Ho

He

GenBank accession no.

Coco6

F: *AACCAAGCTGTCAAAGGAGA

VIC

(ATCT)13

60/50

20

0.396

8

0.55

0.54

KT288258

R: TTTCCTGGTGCGGAGAAGTA

         

Coco12

F: *GAGGCTTTCAGCGATATGGG

6FAM

(AGAT)7

60/50

18

0.173

5

0.72

0.72

KT288259

R: GCTGCACTTGCCTGTTGTTTA

         

Coco30

F: *GTGCAAACCACTCCAGAAT

6FAM

(GGAT)16

60/50

20

0.910

6

0.70

0.80

KT288260

R: GCTGTCACCAGTGGCTTTAAT

         

Coco31

F: *TGGCTACTTACCCGGAATCTC

NED

(ATGT)8

60/50

20

0.470

3

0.25

0.30

KT288261

R: CTTCTCTACCGCCCATCACA

         

Coco32

F: ATGCAAATCTCCGTGTATCA

NED

(ATCT)9

60/50

20

0.422

8

0.80

0.80

KT288262

R: *CCTCCCTTTGTCCTTTCTGG

         

Coco36

F: CCTTCTGCGCTGTGTTCAAA

NED

(CTT)8

60/50

20

0.008

5

0.40

0.71

KT288263

R: *CTGAGGTGCAAGCTTTCCTG

         

Coco45

F: TGACCAACACAGAGCAGATATT

6FAM

(GT)11

60/50

19

0.353

3

0.53

0.54

KT288264

R: *GGAACCTCTGAGTCCAAA

         

Coco50

F: *ATCCCATCAAAGGTCCACG

VIC

(AC)13

60/50

20

0.157

5

0.50

0.64

KT288265

R: CCACGACAGCTGATGAGAGA

         
  1. All loci were in Hardy–Weinberg and linkage equilibrium after Bonferroni correction for multiple tests
  2. Asterisks show location of CAG tag for each primer pair, T a annealing temperatures for touchdown protocol for each locus, n number of individuals genotyped, K number of alleles, H o observed heterozygosity, H e expected heterozygosity