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Table 2 Putative fimbriae-associated genes

From: Identification of putative adhesins of Actinobacillus suis and their homologues in other members of the family Pasteurellaceae

ASU2 locus tag

GenInfo (GI) number

(Possible) gene name

Annotated protein function

Top App homologue/E value

Top Pasteurellaceae homologue/E value

Top other homologue/E value

ASU2_00450

407387739

(pilF) c

Putative fimbrial biogenesis and twitching motility protein PilF-like protein

Ser. 3 str. JL03

2E−116

Actinobacillus capsulatus

4e−114

Vibrio nigripulchritudo

3e−28

ASU2_04295

407388504

flp1

flp operon protein

Ser. 4 str. M62

1e−24

Actinobacillus capsulatus

2E−27

Vibrio owensii

2e−05

ASU2_04300

407388505

(flp2) b

Hypothetical protein

Ser. 7 str. AP76

1e−16

Actinobacillus ureae

3E−24

Vibrio sp. HENC-02

4.3

ASU2_04305

407388506

(tadV) c

flp operon protein B; Flp pilus assembly protein, protease CpaA

Ser. 5b str. L20

9E−69

Actinobacillus capsulatus

6e−55

Yersinia rohdei ATCC 43380

5e−23

ASU2_04310

407388507

(rcpC)

flp operon protein C

Ser. 4 str. M62

3e−123

Actinobacillus capsulatus

3E−164

Yersinia similis

2e−19

ASU2_04315

407388508

(rcpA)

Rough colony protein A; flp pilus assembly protein, secretin CpaC

Ser. 7 str. AP76

0.0

Actinobacillus capsulatus

0.0

Yersinia similis

1e−101

ASU2_04320

407388509

rcpB

Rough colony protein B

Ser. 12 str. 1096

4e−84

Actinobacillus capsulatus

1E−102

Ochotona princeps

2.3

ASU2_04325

407388510

(tadZ) c

flp pilus assembly protein, ATPase; CpaE

Ser. 5b str. L20

0.0

Actinobacillus capsulatus

0.0

Yersinia bercovieri ATCC 43970

3e−58

ASU2_04330

407388511

tadA

Tight adherence protein A; Flp pilus assembly protein, ATPase CpaF

Ser. 5b str. L20

0.0

Actinobacillus capsulatus

0.0

Yersinia aldovae ATCC 35236

4e−179

ASU2_04335

407388512

tadB

Tight adherence protein B; Flp pilus assembly protein TadB

Ser. 1 str. 4074

0.0

Actinobacillus capsulatus

0.0

Serratia marcescens VGH107

5e−64

ASU2_04340

407388513

tadC

Tight adherence protein C; Flp pilus assembly protein TadC

Ser. 13 str. N-273

8e−160

Actinobacillus capsulatus

6E−164

Serratia marcescens VGH107

9e−36

ASU2_04345

407388514

tadD

Tight adherence protein D; Flp pilus assembly protein TadD, contains TPR repeats

Ser. 13 str. N-273

3e−129

Actinobacillus capsulatus

8E−148

Hafnia alvei ATCC 51873

7e−52

ASU2_04350

407388515

tadE

Tight adherence protein E

Ser. 10 str. D13039

2E−86

Actinobacillus capsulatus

3e−84

Serratia marcescens VGH107

2e−25

ASU2_04355

407388516

tadF

Tight adherence protein F

Ser. 6 str. Femo

2E−66

Actinobacillus capsulatus

1e−59

Yersinia enterocolitica

2e−12

ASU2_04360

407388517

tadG

Tight adherence protein G

Ser. 2 str. S1536

0.0

Mannheimia haemolytica

0.0

Yersinia frederiksenii ATCC 33641

6e−19

ASU2_05030

407388651

(pilD) c

Fimbrial leader peptidase; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Ser. 1 str. 4074

3e−56

Actinobacillus ureae

1E−135

Enterococcus faecium EnGen0131

0.014

ASU2_05035

407388652

(pilC) c

Pili/fimbriae biogenesis protein; Type II secretory pathway, component PulF

Ser. 7 str. AP76

5e−112

Actinobacillus ureae

0.0

Glaciecola punicea DSM 14233

2e−29

ASU2_05040

407388653

(hofB, pilB) c

Fimbrial biogenesis protein; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Ser. 5b str. L20

0.0

Actinobacillus ureae

0.0

Plesiomonas shigelloides 302-73

3e−117

ASU2_05045

407388654

apfA (ppdD, pilA) c

Type 4 prepilin subunit; Tfp pilus assembly protein, major pilin PilA

Ser. 12 str. 1096

5e−37

Actinobacillus ureae

1E−70

Bacillus sp. BVB01

5e−20

ASU2_06115

407388868

hofQ (comE) b,c

Type II secretory pathway, component HofQ

Ser. 5b str. L20

0.0

Actinobacillus ureae

0.0

Plesiomonas shigelloides 302-73

3e−100

ASU2_06120

407388869

(comD) b,c

Hypothetical protein; Ribosomal protein S15P/S13E

Ser. 5b str. L20

3e−59

Actinobacillus ureae

8.00E−60

Streptomyces sp. AA0539

0.049

ASU2_06125

407388870

(comC) b,c

Hypothetical protein

Ser. 7 str. AP76

9e−51

Actinobacillus capsulatus

4.00E−77

Klebsiella pneumoniae MGH 52

0.12

ASU2_06130

407388871

(comB) b,c

Hypothetical protein

Ser. 3 str. JL03

2e−65

Actinobacillus capsulatus

5e−95

Tepidiphilus margaritifer

0.49

ASU2_06135

407388872

(comA) b,c

Hypothetical protein

Ser. 10 str. D13039

7e−106

Actinobacillus capsulatus

4E−131

Desulfosarcina sp. BuS5

1.9

ASU2_11115

407389857

comF c

Competence

Ser. 10 str. D13039

9e−97

Actinobacillus capsulatus

7E−150

Serratia fonticola AU-AP2C

7e−47

  1. () indicates a suggested name that was not present in the annotation
  2. aFunction assigned by conserved motifs
  3. bIdentified by BASys
  4. cClassified by description of homologues