Table 1 Belvu command-line examples. Examples of the type of processing that can be performed in a single command-line call to Belvu

Alignment

Export to a different format

Alignment

Alignment

Remove sequences >80 % identical and columns with conservation <0.9

Alignment

Alignment

Construct neighbour-joining tree using Kimura distance correction

Distance matrix

Distance matrix

Reconstruct tree

Tree

Alignment

Apply bootstrap analysis

Bootstrap trees