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Table 1 Characterization of 30 EST-SSRs in the Chinese mitten crab Eriocheir sinensis

From: Identification and characterization of thirty novel microsatellite DNA markers from the Chinese mitten crab Eriocheir sinensis expressed sequence tags

Locus

GenBank accession no.

Repeat motif

Primer sequence (5′–3′)

T a (°C)

No. of individuals

No. of alleles

Size range (bp)

H O

H E

P value

ES27

FL571941

(GT)11

F: TGTGATGAGAAGAAACCAAAGA

52

59

8

107–123

0.712

0.797

0.0005*

R: AATACCTGCTGGCGATGA

ES39

FG359711

(GT)17

F: AGGACGAAAGTTGGAGGG

55

56

8

114–128

0.482

0.864

0.0000*

R: AAATACAAATCTACGGGAGACAC

ES104

FL569100

(TG)21

F: TCACAACTACGAAAACCT

48

53

3

190–200

0.047

0.047

1.0000

R: GAGTGTCAGTGTATGGAAT

ES108

FG984086

(GT)19

F: GTAAACCCTACGAAACCATA

54

59

15

91–119

0.932

0.932

0.0000*

R: ACTCCCTAAACTACCTAACTACCA

ES130

FL570152

(GGC)7

F: CGTTCGTTGTGAGCGTCTGC

57

60

4

145–154

0.167

0.159

1.0000

R: CGCCTGGTCCATCTCATCG

ES212

FG984116

(CCA)6(CAA)10

F: GTGACACTGATGCCTGACGA

55

56

4

181–190

0.482

0.583

0.2114

R: TTATGCCTTTATTGACCGAGAC

ES271

FG359821

(TG)12

F: GCTTCTCACCCGTGATGT

54

49

6

176–186

0.615

0.754

0.0065

R: CTCCTCCTTTGCTTTCTTTA

ES352

FL572494

(GT)10

F: CACTCGGTACAAACATCAC

53

56

17

91–127

0.768

0.929

0.0000*

R: AATGGGTATGGATTTAGTGT

ES582

FL570362

(GA)26

F: ACCTCCAAGCCCCTTACC

53

58

5

241–261

0.293

0.296

0.6958

R: GAACAAACACGAGGGACAAC

ES584

FL574606

(CA)22

F: AGGGAAGTTGTAAAGGTAAGGA

49

56

9

222–240

0.429

0.863

0.0000*

R: ATGGGAATGAGATGAGGATAGA

ES645

FL571837

(AC)13

F: GACGCACGACAACAACCTC

60

56

11

122–158

0.522

0.912

0.0000*

R: CCACTCCTAGTCAACGGAAAGA

ES709

FL574505

(GCA)7

F: GCAGCCACAACCAGCAGAAG

60

60

6

197–212

0.233

0.219

1.0000

R: CTCGCCATGCAGGATCACC

ES776

FG357327

(CA)34

F: GTTGGTGTTGAAGGAGCCA

53

59

4

204–220

0.410

0.557

0.1180

R: CTTAATCCGTTGCGTCAGC

ES789

GE340666

(GT)25

F: TCGGGTGAGTTAGGTGTAGG

52

53

18

178–218

0.170

0.929

0.0000*

R: AGCAAGGCACTTTGAAGC

ES851

GE340258

(CAC)7

F: TCCAACCAGGCGGCAAAG

54

54

7

216–240

0.778

0.814

0.0580

R: AGCAAGTCCACCGAACACCAT

ES911

FL569216

(TTCA)7

F: CGGCGAGACTCACGAACT

56

53

5

242–258

0.453

0.634

0.0012*

R: CGAGGGTGAAGAGGCATT

ES998

FL572952

(GT)5N(TG)5N2(TG)12

F: CGACGGTGTCAGATTAGTG

56

51

8

217–231

0.392

0.860

0.0000*

R: ACCAACGGGCTCAAGAAG

ES1045

FL575077

(GT)28

F: GGAGCACCACCGTAAAGATA

55

55

17

112–148

0.582

0.935

0.2415

R: TCAACACGAAACCGCCAC

ES1053

FL572054

(CA)10

F: CTACACCAAGACCTCCTCGT

57

58

6

145–155

0.741

0.703

0.3476

R: GGCTGGTTTGTTGGGTAAG

ES1126

FG359126

(AAGG)12

F: TGTCCAGTCTCCCATCAA

54

60

14

180–240

0.883

0.907

0.7140

R: TGGTATGGTCGCTAATCTC

ES1139

FL569992

(GA)11

F: ACAGACGCACCTCCAAGC

55

59

20

110–150

0.644

0.925

0.0000*

R: TTAGAACAAACACGAGGGACA

ES1171

FG357452

(AC)8N5(TC)6

F:CAATCTGCCCTAATCTGTCTGTAA

57

55

8

156–172

0.900

0.871

0.0000*

R:GGGAAAGGTAGGAGGATAAGTGA

ES1178

GE341515

(ACC)7

F: TCCCATCGCCGTAGAAAC

55

60

3

138–146

0.150

0.144

1.0000

R: ACGCCAGACTGGACAAGC

ES1240

FG982578

(TACA)11

F: ATTGTAGCCATACCAGCAT

52

60

13

152–200

0.883

0.890

0.3087

R: ACAAATCTTACAACTACGGC

ES1289

FL574500

(TTA)13

F: ACCTTGTGGATACCAGCAT

50

55

12

124–169

0.782

0.872

0.0000*

R: TTCCCTTCAACCATACATAA

ES1293

FL569028

(GTA)7N8(GTA)5

F: GCCTCAATATCGGGCTTAT

55

59

7

129–176

0.763

0.769

0.2826

R: CCTCCCTGCGACTTCTACT

ES1300

FL575122

(TG)10

F: CCCTTGTTGATTGCCCTA

55

52

5

186–194

0.519

0.608

0.0846

R: GTCACGAAGAAGCACCTC

ES1482

FL576108

(TG)7

F: ACTATCCCTGCCTCACTACCG

57

60

7

115–129

0.250

0.522

0.0000*

R: GAACAAACATTACCGTCACTCG

ES1507

FL572842

(AGT)5N2(TAG)9

F: TGGAGTAGGTCGGTTCGGT

57

58

6

197–215

0.603

0.743

0.0299

R: TAGCAACATCCCTCGTCCTC

ES1513

FL574610

(AG)9

F: AACAGTGGCAGGAAACAGAAAG

57

56

7

100–114

0.217

0.739

0.0000*

R: AGGGAAGGATGAGTGTGAGCA

  1. T a annealing temperature, H O observed heterozygosity, H E expected heterozygosity
  2. * Significant departure (P < 0.05) from expected Hardy–Weinberg equilibrium conditions after correction for multiple tests (k = 30)