Table 1 Genes regulated by CSF2 in inner cell mass after adjustment for a false discovery rate of 2 %
From: Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2
Gene symbol or description | Mean counts, control | Mean counts, CSF2 | Fold change, CSF2/control | Adjusted P value |
|---|---|---|---|---|
Upregulated | ||||
 FRMPD3 | 1.4 | 21.3 | 14.71 | 0.045 |
 NDNF | 1.7 | 22.8 | 13.29 | 0.019 |
 LAPTM5 | 43.3 | 531.8 | 12.28 | 0.000 |
 Olfactory receptor 4A47 (LOC100294956) | 4.4 | 37.2 | 8.48 | 0.014 |
 CYP3A5 | 37.3 | 230.9 | 6.20 | 0.000 |
 Serine incorporator 1 pseudogene (LOC781002) | 25.2 | 152.2 | 6.05 | 0.000 |
 TMEM182 | 17.8 | 83.6 | 4.69 | 0.014 |
 CSN3 | 97.6 | 444.2 | 4.55 | 0.000 |
Downregulated | ||||
 MYADM-like (ENSBTAG00000001526) | 10.2 | 0 | – | 0.006 |
 CD68 | 1156.8 | 491.9 | 0.43 | 0.024 |
 CFAP54 | 162.4 | 69.2 | 0.43 | 0.026 |
 DAG1 | 345.6 | 141.4 | 0.41 | 0.026 |
 HSD3B1 | 183.6 | 71.7 | 0.39 | 0.002 |
 EKC/KEOPS complex subunit LAGE3 (LOC618023) | 87.4 | 29.9 | 0.34 | 0.019 |
 SEMA4G | 127.1 | 42.5 | 0.33 | 0.026 |
 BAG3 | 835.4 | 204.9 | 0.25 | 0.028 |
 PAQR7 | 187.9 | 31.5 | 0.17 | 0.013 |
 PAH | 56.2 | 8.8 | 0.16 | 0.012 |
 MUC3A | 79.6 | 12.4 | 0.16 | 0.014 |
 SOX30 | 85.3 | 12.6 | 0.15 | 0.013 |
 HSPA6 | 240.0 | 29.3 | 0.12 | 0.000 |
 SYNE2 | 635.1 | 76.7 | 0.12 | 0.000 |
 OR5T2 | 88.6 | 10.1 | 0.11 | 0.000 |
 Olfactory receptor, family 5, subfamily T-like (ENSBTAG00000039348) | 11.7 | 0.6 | 0.05 | 0.046 |
 CMYA5 | 38.5 | 2.0 | 0.05 | 0.006 |