Novel microsatellite markers for Distylium lepidotum (Hamamelidaceae) endemic to the Ogasawara Islands

Sugai, Kyoko; Setsuko, Suzuki

doi:10.1186/s13104-016-2137-9

BMC Research Notes

Table 2 Genetic diversity of the 32 microsatellite markers in the two Distylium lepidotum populations

From: Novel microsatellite markers for Distylium lepidotum (Hamamelidaceae) endemic to the Ogasawara Islands

Locus	Chichijima Island					Hahajima Island					F _Null
Locus	N	N _A	H _O	H _E	F _IS ^a	N	N _A	H _O	H _E	F _IS ^a	F _Null
Isu00524	22	5	0.182	0.381	0.523*	20	5	0.450	0.650	0.308*	0.265
Isu01062	24	19	0.917	0.925	0.009	20	9	0.850	0.829	−0.026	0.018
Isu01853	24	12	0.875	0.891	0.018	20	8	0.750	0.836	0.103	0.038
Isu03838	24	8	0.625	0.800	0.219	20	6	0.700	0.749	0.065	0.116
Isu04069	24	9	0.375	0.793	0.527***	20	6	0.550	0.551	0.002	0.249
Isu04385	24	14	0.917	0.884	−0.037	20	7	0.950	0.788	−0.206	−0.032
Isu04423	24	16	0.750	0.844	0.111	20	8	0.850	0.826	−0.029	0.045
Isu04472	24	18	0.958	0.913	−0.049	20	6	0.600	0.613	0.020	0.026
Isu04870	24	4	0.833	0.702	−0.187	20	4	0.700	0.638	−0.098	−0.057
Isu04950	24	7	0.625	0.661	0.055	20	9	0.950	0.830	−0.145	0.050
Isu04954	24	7	0.583	0.582	−0.003	20	5	0.750	0.678	−0.107	0.032
Isu05730	24	8	0.833	0.816	−0.021	20	6	0.800	0.771	−0.037	−0.004
Isu06843	24	14	0.875	0.886	0.013	20	8	0.900	0.805	−0.118	−0.004
Isu07049	24	15	0.833	0.917	0.091	20	8	0.550	0.746	0.263*	0.109
Isu07063	17	9	0.235	0.843	0.721***	6	1	–	–	–	0.659
Isu09807	24	13	0.750	0.788	0.048	20	5	0.850	0.726	−0.170	−0.001
Isu09853	24	7	0.625	0.787	0.206	20	8	0.700	0.756	0.074	0.112
Isu10193	24	9	0.750	0.848	0.116	20	7	0.400	0.770	0.481**	0.174
Isu11459	24	8	0.625	0.500	−0.250	20	4	0.400	0.368	−0.088	−0.104
Isu12115	24	3	0.333	0.588	0.433	20	3	0.700	0.609	−0.150	0.141
Isu12238	24	12	0.958	0.858	−0.117	20	7	0.600	0.693	0.134	0.019
Isu12265	24	13	0.583	0.845	0.310**	20	7	0.800	0.800	0.000	0.126
Isu12586	24	14	0.875	0.862	−0.015	20	9	0.650	0.769	0.154	0.051
Isu13849	24	9	0.875	0.780	−0.122	20	4	0.500	0.524	0.045	−0.014
Isu13965	24	12	0.875	0.885	0.012	20	6	0.800	0.769	−0.041	0.010
Isu15054	24	22	0.833	0.940	0.114*	20	8	0.800	0.845	0.053	0.060
Isu16246	24	12	0.667	0.840	0.207	20	9	0.800	0.836	0.043	0.087
Isu16408	24	9	0.917	0.842	−0.089	20	7	0.600	0.578	−0.039	0.046
Isu16655	24	10	0.667	0.789	0.155	20	7	0.750	0.800	0.063	0.073
Isu16805	24	11	0.500	0.857	0.416*	20	8	0.500	0.701	0.287	0.284
Isu17435	24	12	0.833	0.838	0.005	20	6	0.800	0.703	−0.145	0.014
Isu17619	24	3	0.167	0.156	−0.067	20	3	0.600	0.496	−0.209	−0.047
Average	–	10.8	0.695	0.776	0.105	–	6.4	0.675	0.689	0.016	–

N = number of genotyped individuals; N _A = number of alleles per locus; H _O = observed heterozygosity; H _E = expected heterozygosity; F _IS = fixation index; F _Null = null allele frequency
^a Asterisks indicate significant deviation from Hardy–Weinberg equilibrium after Bonferroni correction (^* P < 0.05, ^** P < 0.01, ^*** P < 0.001)

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ISSN: 1756-0500

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