From: Report on the development of putative functional SSR and SNP markers in passion fruits
SNP marker code | Position in the contig | Putative gene function | SNP class | Parental genotypes | F1 genotypes | ||
---|---|---|---|---|---|---|---|
‘2(12)’ | ‘SV3’ | ‘F1-67’ | ‘F1-100’ | ||||
Pa_F-P9A06 | 532 | Lipoxygenase [Passiflora edulis] | I | G/C | G/G | G/C | C/C |
Pa_F-P5A12_F | 127 | ABC transporter G family member 36-like [Brassica napus] | E | A/T | T/T | A/T | T/T |
235 | I | T/C | T/C | T/C | T/C | ||
Pa_F-P5A12_R | 160 | ABC transporter G family member 36-like [Brassica napus] | I | G/T | G/T | G/T | G/T |
169 | I | G/A | G/G | G/A | G/G | ||
Pa_F-P9B08 | 333 | KINASE 2B family protein [Populus trichocarpa] | I | A/A | A/C | A/A | A/A |
342 | I | T/T | A/T | T/T | T/T | ||
344 | I | C/C | A/C | C/C | C/C | ||
347 | I | T/T | G/T | T/T | T/T | ||
Pa_F-P10C11 | 44 | ATP binding protein, putative [Ricinus communis] | E | ?/? | C/T | C/T | C/T |
Pa_F-Contig10 | 158 | Uncharacterized protein LOC100855146 [Vitis vinifera] | E | G/C | G/G | G/C | G/C |
Pa_F-Contig71 | 309 | Hypothetical protein POPTR_0010s13740 g [Populus trichocarpa] | E | G/T | T/T | T/T | G/T |
323 | E | C/C | G/C | G/C | G/C | ||
Pa_R-Contig127 | 108 | Hypothetical protein MANES_02G192700 [Manihot esculenta] | E | G/C | C/C | G/C | ?/? |
336 | I | G/A | G/G | G/A | ?/? | ||
364 | I | A/C | A/A | A/C | ?/? | ||
Pa_ F-Contig68 | 104 | Unnamed protein product [Vitis vinifera] | E | T/C | T/C | T/C | C/C |
303 | E | C/C | T/C | C/C | C/C | ||
343 | E | T/C | C/C | ?/? | T/T | ||
347 | E | T/C | C/C | ?/? | C/C | ||
349 | E | T/C | C/C | ?/? | T/T | ||
Pa_F-P10D05 | 181 | Hypothetical protein SOVF_097380 [Spinacia oleracea] | E | A/G | A/A | G/G | A/A |
350 | E | A/T | T/T | A/A | T/T | ||
371 | E | A/G | A/A | G/G | A/A | ||
381 | E | A/G | G/G | A/A | G/G | ||
Pa_F-P7E01 | 212 | Hypothetical protein LR48_Vigan02g193200 [Vigna angularis] | E | G/C | C/C | G/C | G/C |
Pa_F-P8F01 | 163 | Syntaxin-32 [Jatropha curcas] | I | T/C | T/C | T/C | T/T |
246 | I | T/G | T/G | T/G | T/T | ||
247 | I | T/G | T/G | T/G | T/T | ||
Pa_F-P4G06 | 287 | Gamma-glutamylcysteine synthetase precursor [Glycine max] | I | G/C | C/C | C/C | C/C |
Pa_F-P5G12 | 264 | Hypothetical protein POPTR_0001s31350 g [Populus trichocarpa] | E | T/T | A/T | A/T | T/T |
Pa_F-P9H12 | 286 | Uncharacterized protein LOC105122267 isoform X2 [Populus euphratica] | I | G/A | G/A | G/A | G/A |
Pa_R-P3A02 | 186 | Hypothetical protein MANES_03G177700 [Manihot esculenta] | I | T/C | C/C | ?/? | T/C |
225 | I | T/C | C/C | ?/? | T/C |