Table 1 Salmonella Typhimurium strains belonging to the same phage type show different CRISPR/CRISPOL type
From: Phage typing or CRISPR typing for epidemiological surveillance of Salmonella Typhimurium?
Phage type | Isolate ID (source) | Lab | Accession Number | CRISPR type | CRISPOL type | References |
|---|---|---|---|---|---|---|
DT1 | DT1 (Clinical isolate) | Wellcome Trust Sanger Institute | aTraces-0ajzxba (ERS007598) | 8579 | 430 | [2] |
TM 68-619 (Clinical isolate) | Institut Pasteur | Traces-0MviFiU | 2536 | 54 | Enterobase | |
TM 65-111 (Clinical isolate) | Institut Pasteur | Traces-0BvXZSr | 7387 | 90 | Enterobase | |
DT10 | MS34 (Control DT10) | NSSLRL | bTraces-0eeFHtx (PRJEB18673) | 9509 | 1629 | This study |
S81-784 (Clinical isolate) | Institut Pasteur | Traces-0bXCHix | 9913 | 1688 | Enterobase | |
DT15a | MS41 (Control DT15a) | NSSLRL | bTraces-0FVsVub (PRJEB18673) | 9517 | 1634 | This study |
S81-798 (Clinical isolate) | Institut Pasteur | Traces-0QWCSHz | 9916 | 1756 | Enterobase | |
DT41 | M11-2004 (Control DT41) | NSSLRL | bTraces-0hioJez (PRJEB18673) | 9513 | 1630 | This study |
CQ 41 (Clinical isolate) | Institut Pasteur | Traces-0BkvapO | 7434 | 223 | Enterobase | |
S02-0321 (Clinical isolate) | Institut Pasteur | Traces-0JWTeTs | 9929 | 1766 | Enterobase |