From: Genotyping and characterization of prophage patterns in clinical isolates of Staphylococcus aureus
Primer sequence 5′ → 3′ | PCR product length (bp) | Primer position | References | |
---|---|---|---|---|
SGA1 SGA2 | TATCAGGCGAGAATTAAGGG CTTTGACATGACATCCGCTTGAC | 744 | 1409–1428 2152–2130 | [1] |
SGB1 SGB2 | ACTTATCCAGGTGGYGTTATTG TGTATTTAATTTCGCCGTTAGTG | 405 | 1639–1660 2043–2021 | [1] |
SGF1 SGF2 | CGATGGACGGCTACACAGA TTGTTCAGAAACTTCCCAACCTG | 155 | 515–553 669–647 | [1] |
SGFa1 SGFa2 | TACGGGAAAATATTCGGAAG ATAATCCGCACCTCATTCCT | 548 | 2487–2506 3034–3015 | [1] |
SGFb1 SGFb2 | AGACACATTAAGTCGCACGATAG TCTTCTCTGGCACGGTCTCTT | 147 | 20013–20035 20159–20139 | [1] |
SGL1 SGL2 | GCTTAAAACAGTAACGGTGACAGTG TGCTACATCATCAAGAACACCTGG | 548 | 2263–2287 2911–2888 | [1] |
SGD1 SGD2 | TGGGCTTCATTCTACGGTGA GTAATTTAATGAATCCACGAGAT | 331 | 781–800 1111–1089 | [1] |
REP1 REP 2 | IIIICGICGICATCIGGC ICGICTTATCIGGCCTAC | Variable | [18] |