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Table 1 Protein groups ( n = 58) newly identified in Taenia solium metacestode excretion/secretion proteins, organized by Gene Ontology annotation information on biological processes and molecular functions

From: Use of expressed sequence tags as an alternative approach for the identification of Taenia solium metacestode excretion/secretion proteins

Gene ontology classification

Closest organism

gi code

Proteinsa)

ESTsb)

 

Protein group

    

1) No Gene Ontology classification

 

Major egg antigen

Clonorchis sinensis

358336515

1

2

 

ES1 protein homolog

Multiplec)

-

3

5

 

Phosphoglyceride transfer protein

Taenia asiatica

124782980

1

7

 

Alpha-2-macroglobulin-like protein 1

Clonorchis sinensis

358333571

1

5

 

Aldose 1-epimerase

Clonorchis sinensis

358334888

1

2

 

SJCHGC02626 protein

Schistosoma japonicum

-

3

7

 

Hypothetical protein

Schistosoma mansoni

256079415

1

4

 

TSP1

Echinococcus multilocularis

209967595

1

4

 

Putative major vault protein

Echinococcus granulosus

62178032

1

2

2) Binding (miscellaneous)

 
 

Filamin

Multiple

-

3

7

 

Methionyl-tRNA synthetase cytoplasmic

Clonorchis sinensis

358255967

1

5

 

SJCHGC09631 protein

Schistosoma spp.

-

2

2

 

four and a half LIM domains protein 3

Clonorchis sinensis

358341124

1

7

 

Alpha-actinin isoform B

Taenia asiatica

124783372

1

3

 

Calumenin

Taenia asiatica

124784033

1

2

 

Calcium-binding protein

Schistosoma mansoni

256071353

1

2

 

Lysyl oxidase-like

Schistosoma mansoni

256072781

1

2

 

Porphobilinogen synthase

Multiple

-

3

3

 

Phosphoglucomutase-1

Clonorchis sinensis

358337844

1

2

 

Fibrillar collagen

Multiple

-

9

16

3) Glycolysis/Metabolic processes (miscellaneous)

 
 

Adenylosuccinate synthetase

Schistosoma mansoni

387912858

1

4

 

Adenylate kinase

Multiple

-

2

4

 

UDP-glucose pyrophosphorylase 2

Schistosoma spp.

-

2

2

 

Hypothetical protein SINV_09109

Solenopsis invicta

322793762

1

2

 

Aspartate aminotransferase

Multiple

-

3

5

 

Lactate dehydrogenase A

Taenia solium

318054471

1

6

 

SJCHGC05968 protein

Multiple

-

2

2

 

Methylthioadenosine phosphorylase

Multiple

-

2

2

 

Ornithine aminotransferase

Multiple

-

3

3

 

Endoglycoceramidase

Multiple

-

3

3

 

Aminoacylase

Multiple

-

2

2

 

Glucose-6-phosphate 1-dehydrogenase-like

Sus scrofa

350595984

1

2

 

Phosphoglycerate mutase

Multiple

-

3

7

4) (Endo)peptidase activity

 
 

Calpain

Multiple

-

5

5

 

UDP-glucose 4-epimerase

Multiple

-

2

2

 

Dipeptidyl-peptidase

Multiple

-

2

3

 

Glutamate carboxypeptidase 2

Clonorchis sinensis

358331956

1

3

5) Endopeptidase inhibitor activity

 

Kunitz protein 8

Multiple

-

2

3

6) Cell redox homeostasis/Oxidation-reduction related

 
 

Carbonyl reductase

Schistosoma spp.

-

3

3

 

Methionine sulfoxide reductase

Multiple

-

2

4

 

procollagen-lysine, 2-oxoglutarate

Multiple

-

3

6

 

5-dioxygenase 3

    

7) Transport

 
 

Charged multivesicular body protein

Multiplec)

-

3

4

 

SJCHGC06082 protein

Multiple

-

2

8

 

Glycolipid transfer protein-like protein

Taenia asiatica

124782916

1

2

 

Gamma-soluble NSF attachment protein

Multiple

-

4

10

 

Sodium/glucose cotransporter

Multiple

-

2

7

8) Motor activity/Cytoskeleton and Microtubule related

 
 

Tubulin polymerization-promoting protein

Multiple

-

2

2

 

Myophilin

Multiple

-

2

19

9) Miscellaneous Gene Ontology classification

 
 

Translation initiation factor 5A

Multiple

-

2

4

 

Ubiquitin-conjugating enzyme

Multiple

-

4

10

 

Protein-l-isoaspartate o-methyltransferase

Schistosoma mansoni

256081696

1

2

 

Protein DJ-1-like

Multiple

-

2

4

 

6-phosphogluconolactonase

Multiple

-

2

4

 

SJCHGC02435 protein

Schistosoma japonicum

56756018

1

5

 

Family T2 unassigned peptidase

Schistosoma mansoni

256088374

1

4

 

3’(2’), 5’-bisphosphate nucleotidase

Multiple

-

2

2

 

RAB GDP dissociation inhibitor alpha

Multiple

-

2

3

 

Laminin

Multiple

-

2

2

  1. a) The number of proteins in each protein group.
  2. b) The number of expressed sequence tags that were matched to proteins in this protein group.
  3. c) ’Multiple’ indicates that different (helminth) genera have identified proteins in that protein group.
  4. For simplicity, all protein groups are represented by one protein.
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BMC Research Notes

ISSN: 1756-0500

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