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Table 1 miRNAs differentially expressed in rat liver after PH and comparison with miRNA expression after SL

From: Independent effects of sham laparotomy and anesthesia on hepatic microRNA expression in rats

miRNA

FC (SL/control)

FC (PH/control)

Accession No.

 12 h

 24 h

 48 h

 12 h

 24 h

 48 h

A miRNAs similarly deregulated after partial hepatectomy and sham laparotomy

rno-miR-100

0.72*

0.92

0.86

0.69**

0.70**

0.88

MIMAT0000822

rno-miR-105

1.56*

1.50***

1.49 **

1.49

1.50***

1.61*

MIMAT0012825

rno-miR-133a

0.99

0.76*

0.70*

0.75

0.68**

0.80

MIMAT0000839

rno-miR-133b

0.82

0.68*

0.74

0.88

0.59**

0.84

MIMAT0003126

rno-miR-383

1.16

1.26*

1.25

1.25

1.29*

1.07

MIMAT0003114

rno-miR-466c

1.24

1.33**

1.03

1.36

1.53***

1.28

MIMAT0005279

rno-miR-483

0.78*

0.82***

0.73***

0.60***

0.70***

0.56***

MIMAT0003121

rno-miR-598-5p

1.32

1.41**

1.32

1.46

1.40*

1.24

MIMAT0005324

rno-miR-628

1.29

1.37*

1.22

1.38*

1.31*

1.24

MIMAT0012836

rno-miR-1224

0.72

0.73***

0.79

0.65*

0.69**

0.64*

MIMAT0012827

B miRNAs with opposite regulation after partial hepatectomy and sham laparotomy

rno-miR-29a

1.05

1.24**

1.17

0.91

0.78***

0.85

MIMAT0000802

C miRNAs with deregulation after sham laparotomy but not following partial hepatectomy

rno-miR-23b

0.97

1.21***

1.16*

0.87

0.80*

0.86

MIMAT0000793

rno-miR-30b-5p

1.14

1.22**

1.17

0.88

0.88*

0.90

MIMAT0000806

rno-miR-31

1.16

1.21***

1.24*

0.95

0.92

0.85

MIMAT0000810

rno-miR-92b

0.70*

0.75**

0.66***

0.87

0.92

0.89

MIMAT0005340

rno-miR-129

0.81

0.86

0.77*

1.03

0.86

0.87

MIMAT0000600

rno-miR-143

1.27

1.32***

1.38*

1.06

0.98

1.00

MIMAT0000849

rno-miR-151

1.13

1.21**

1.18*

0.91

0.93

0.91

MIMAT0000614

rno-miR-191

1.12

1.27***

1.22*

0.98

0.96

1.04

MIMAT0000866

rno-miR-192

1.15

1.21**

1.18

0.94

0.87**

0.95

MIMAT0000867

rno-miR-194

1.17

1.22**

1.20

0.93

0.88**

0.96

MIMAT0000869

rno-miR-195

1.18

1.21***

1.17*

0.95

0.87

0.92

MIMAT0000870

rno-miR-201

1.33*

1.30**

1.30*

1.31

1.18

1.11

MIMAT0012846

rno-miR-205

0.75

0.68**

0.76*

0.94

0.97

0.92

MIMAT0000878

rno-miR-224

1.12

1.28

1.46*

1.06

1.14

1.40

MIMAT0003119

rno-miR-295

0.82

0.67**

0.69*

0.99

0.91

0.89

MIMAT0012849

rno-miR-296

0.78

0.77*

0.76

0.84

0.86

0.89

MIMAT0004742

rno-miR-324-5p

0.77

0.76**

0.77*

0.91

0.89

0.92

MIMAT0000553

rno-miR-331

0.76

0.81

0.70*

0.79

0.71*

0.87

MIMAT0000570

rno-miR-337

1.12

1.42**

1.34

1.14

1.23

1.45

MIMAT0000577

rno-miR-343

0.70*

0.73*

0.68*

0.78

0.81

0.85

MIMAT0000591

rno-miR-365

0.66*

0.83*

0.76*

0.85

0.87

0.80

MIMAT0001549

rno-miR-425

1.14

1.21*

1.27*

1.14

1.05

1.12

MIMAT0005314

rno-miR-429

0.91

0.74**

0.81

0.95

0.91

0.81

MIMAT0001538

rno-miR-484

0.75*

0.66***

0.61***

0.89

0.81*

0.71

MIMAT0005319

rno-miR-511

0.94

1.32

1.47*

0.98

0.99

1.12

MIMAT0012829

rno-miR-532-5p

0.99

1.22*

1.22

1.05

0.98

1.05

MIMAT0005322

rno-miR-615

0.78

0.71*

0.87

0.93

0.92

0.96

MIMAT0012835

rno-miR-664

0.88

0.83

0.74*

0.81

0.73*

0.89

MIMAT0003382

rno-miR-667

0.81

0.85**

0.79**

0.84

0.83

0.84

MIMAT0012852

rno-miR-668

0.80

0.73**

0.85

0.94

0.90

0.87

MIMAT0012839

rno-miR-708

1.55*

1.37*

1.47*

1.25

1.21

1.18

MIMAT0005331

rno-miR-760-3p

0.67*

0.81

0.81

1.08

1.05

0.87

MIMAT0005337

rno-miR-760-5p

0.78*

0.73***

0.74**

0.89

0.84

0.88

MIMAT0005336

rno-miR-880

0.91

0.74*

0.94

0.87

0.81

0.78

MIMAT0005288

  1. miRNAs listed in this table were significantly deregulated at the same time point after sham laparotomy or after partial hepatectomy in rat liver tissue (<0.8 fold change or > 1.2 fold change compared to normal rat tissue; Empirical Bayes Statistics adjusted for multiple testing, each time point compared with 0 h; *p < 0.05, **p < 0.01, ***p < 0.001). Boldface indicates miRNA deregulation at the same postoperative time point. Abbreviations: FC fold change, SL sham laparotomy, PH partial hepatectomy.