Table 2 Proportion of those SNPs shared by one, two, three and four calling methods predicted to successfully validate on both an Illumina Infinium and an Affymetrix Axiom array using using predictive modeling and simple filtering approaches
Share | Predicted validation success (%) | |||
|---|---|---|---|---|
Infinium | Axiom | |||
Predictive | Filtering | Predictive | Filtering | |
One | 66.8 | 30.7 | 91.7 | 57.0 |
Two | 92.9 | 57.2 | 96.7 | 72.6 |
Three | 89.3 | 52.5 | 93.2 | 68.0 |
Four | 89.9 | 54.0 | 93.3 | 68.2 |