Fig. 7
From: treeman: an R package for efficient and intuitive manipulation of phylogenetic trees
Code snippet for calculating overlap between two different communities using treeman and MoreTreeTool: generate random communities using parameters of community overlap for a random tree, plot as community trees (see Fig. 8), convert trees from phylo to TreeMan using MoreTreeTool [24] ’s as(), generate null communities to test whether the two communities have significant overlap